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7XII

Crystal structure of the aminopropyltransferase, SpeE from hyperthermophilic crenarchaeon, Pyrobaculum calidifontis in complex with 5'-methylthioadenosine (MTA) & aminopropylagmatine

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
Polyamine aminopropyltransferasepolymer30934859.84UniProt (A3MU81)
Pfam (PF17284)
Pfam (PF01564)
Pyrobaculum calidifontisPutrescine aminopropyltransferase,PAPT,Spermidine synthase,SPDS,SPDSY
2E, H, J, L
(A, B, C, D)
5'-DEOXY-5'-METHYLTHIOADENOSINEnon-polymer297.34Chemie (MTA)
3F, I, K, M
(A, B, C, D)
1-{4-[(3-aminopropyl)amino]butyl}guanidinenon-polymer187.34Chemie (AG3)
4G
(A)
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACIDnon-polymer238.31Chemie (EPE)
5N, O, P, Q
(A, B, C, D)
waterwater18.0543Chemie (HOH)
Sequence modifications
A, B, C, D: 1 - 289 (UniProt: A3MU81)
PDBExternal DatabaseDetails
Met -19-initiating methionine
Gly -18-expression tag
Ser -17-expression tag
Ser -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
His -11-expression tag
His -10-expression tag
Ser -9-expression tag
Ser -8-expression tag
Gly -7-expression tag
Leu -6-expression tag
Val -5-expression tag
Pro -4-expression tag
Arg -3-expression tag
Gly -2-expression tag
Ser -1-expression tag
His 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight139439.0
Non-Polymers*Number of molecules9
Total formula weight2176.8
All*Total formula weight141615.8
*Water molecules are not included.

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PDB entries from 2025-06-18

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