7X08
S protein of SARS-CoV-2 in complex with 2G1
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C | Spike glycoprotein | polymer | 1283 | 142530.7 | 3 | UniProt (P0DTC2) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) In PDB | Severe acute respiratory syndrome coronavirus (2019-nCoV SARS-CoV-2) | S glycoprotein,E2,Peplomer protein |
2 | H, I, J | heavy chain of 2G1 | polymer | 452 | 49458.8 | 3 | Homo sapiens (human) | ||
3 | L, M, N | light chain of 2G1 | polymer | 216 | 22593.8 | 3 | Homo sapiens (human) | ||
4 | a, b, c, d, e... | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 24 | In PDB GlyTouCan (G42666HT) | |||
5 | B, C, A | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 30 | Chemie (NAG) | |||
6 | B, A | LINOLEIC ACID | non-polymer | 280.4 | 3 | Chemie (EIC) |
Sequence modifications
A, B, C: 1 - 1273 (UniProt: P0DTC2)
PDB | External Database | Details |
---|---|---|
Pro 817 | Phe 817 | engineered mutation |
Pro 892 | Ala 892 | engineered mutation |
Pro 899 | Ala 899 | engineered mutation |
Pro 942 | Ala 942 | engineered mutation |
Pro 986 | Lys 986 | engineered mutation |
Pro 987 | Val 987 | engineered mutation |
Leu 1274 | - | expression tag |
Glu 1275 | - | expression tag |
Asp 1276 | - | expression tag |
Tyr 1277 | - | expression tag |
Lys 1278 | - | expression tag |
Asp 1279 | - | expression tag |
Asp 1280 | - | expression tag |
Asp 1281 | - | expression tag |
Asp 1282 | - | expression tag |
Lys 1283 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 9 |
Total formula weight | 643749.7 | |
Branched | Number of molecules | 24 |
Total formula weight | 10185.6 | |
Non-Polymers* | Number of molecules | 33 |
Total formula weight | 7477.6 | |
All* | Total formula weight | 661412.9 |