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7WYV

Cryo-EM structure of Na+,K+-ATPase in the E2P state formed by ATP in the presence of 40 mM Mg2+

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, D
(A, C)
Sodium/potassium-transporting ATPase subunit alphapolymer1028113389.92UniProt (Q4H132)
Pfam (PF00690)
Pfam (PF00122)
Pfam (PF13246)
Pfam (PF00702)
Pfam (PF00689)
Squalus acanthias (spiny dogfish)
2B, E
(B, D)
Na+,K+-ATPase beta subunitpolymer30535176.12UniProt (C4IX13)
Pfam (PF00287)
Squalus acanthias (spiny dogfish)Sodium/potassium-transporting ATPase subunit beta-1
3C, F
(G, E)
FXYD domain-containing ion transport regulatorpolymer9410195.82UniProt (Q70Q12)
Pfam (PF02038)
Squalus acanthias (spiny dogfish)
4G, K
(F, K)
alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranosebranched1057.02In PDB
GlyTouCan (G82348BZ)
5H, L
(H, L)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched1114.02In PDB
GlyTouCan (G61751GZ)
6I, M
(I, M)
alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranosebranched894.82In PDB
GlyTouCan (G42466VF)
7J, N
(J, N)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.42In PDB
GlyTouCan (G42666HT)
8IA, KA, O, Q
(C, A)
MAGNESIUM IONnon-polymer24.34Chemie (MG)
9JA, P
(C, A)
SODIUM IONnon-polymer23.02Chemie (NA)
10LA, R
(C, A)
ADENOSINE-5'-TRIPHOSPHATEnon-polymer507.22Chemie (ATP)
11EA, FA, MA, NA, S...
(A, B, C, D)
CHOLESTEROLnon-polymer386.78Chemie (CLR)
12AA, AB, BA, BB, CA...
(A, E, G, C)
1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINEnon-polymer787.124Chemie (PCW)
13CB, DB
(A, C)
waterwater18.010Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight317523.7
BranchedNumber of molecules8
Total formula weight6980.4
Non-Polymers*Number of molecules40
Total formula weight23141.7
All*Total formula weight347645.8
*Water molecules are not included.

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PDB entries from 2024-10-30

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