7WRL
Local structure of BD55-1239 Fab and SARS-COV2 Omicron RBD complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | BD55-1239H | polymer | 127 | 13828.3 | 1 | SARS coronavirus B012 | ||
| 2 | B (B) | BD55-1239L | polymer | 105 | 11049.9 | 1 | SARS coronavirus B012 | ||
| 3 | C (R) | Spike protein S1 | polymer | 193 | 21968.8 | 1 | UniProt (P0DTC2) Pfam (PF09408) | SARS coronavirus B012 |
Sequence modifications
R: 334 - 526 (UniProt: P0DTC2)
| PDB | External Database | Details |
|---|---|---|
| Asp 339 | Gly 339 | variant |
| Leu 371 | Ser 371 | variant |
| Pro 373 | Ser 373 | variant |
| Phe 375 | Ser 375 | variant |
| Asn 417 | Lys 417 | variant |
| Lys 440 | Asn 440 | variant |
| Ser 446 | Gly 446 | variant |
| Asn 477 | Ser 477 | variant |
| Lys 478 | Thr 478 | variant |
| Ala 484 | Glu 484 | variant |
| Arg 493 | Gln 493 | variant |
| Ser 496 | Gly 496 | variant |
| Arg 498 | Gln 498 | variant |
| Tyr 501 | Asn 501 | variant |
| His 505 | Tyr 505 | variant |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 46846.9 | |
| All* | Total formula weight | 46846.9 |
