7WRJ
Local CryoEM structure of the SARS-CoV-2 S6P(B.1.1.529) in complex with BD55-4637 Fab
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | R | Spike protein S1 | polymer | 193 | 21968.8 | 1 | UniProt (P0DTC2) Pfam (PF09408) In PDB | Severe acute respiratory syndrome coronavirus 2 | |
2 | A | BD55-4637H | polymer | 257 | 27750.7 | 1 | Homo sapiens | ||
3 | B | BD55-4637L | polymer | 235 | 24855.6 | 1 | Homo sapiens | ||
4 | C | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) |
Sequence modifications
R: 334 - 526 (UniProt: P0DTC2)
PDB | External Database | Details |
---|---|---|
Asp 339 | Gly 339 | conflict |
Leu 371 | Ser 371 | conflict |
Pro 373 | Ser 373 | conflict |
Phe 375 | Ser 375 | conflict |
Asn 417 | Lys 417 | conflict |
Lys 440 | Asn 440 | conflict |
Ser 446 | Gly 446 | conflict |
Asn 477 | Ser 477 | conflict |
Lys 478 | Thr 478 | conflict |
Ala 484 | Glu 484 | conflict |
Arg 493 | Gln 493 | conflict |
Ser 496 | Gly 496 | conflict |
Arg 498 | Gln 498 | conflict |
Tyr 501 | Asn 501 | conflict |
His 505 | Tyr 505 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 74575.1 | |
Branched | Number of molecules | 1 |
Total formula weight | 424.4 | |
All* | Total formula weight | 74999.5 |