7WPZ
Structure of PDF-2180-COV RBD binding to Bat37 ACE2
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Angiotensin-converting enzyme | polymer | 595 | 69511.1 | 1 | UniProt (A0A7J7V5I6) Pfam (PF01401) In PDB | Pipistrellus pipistrellus (common pipistrelle) | |
2 | B | Spike glycoprotein | polymer | 204 | 22960.8 | 1 | UniProt (A0A1W6ASU7) Pfam (PF09408) In PDB | Bat coronavirus | |
3 | E, J, D | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 3 | In PDB GlyTouCan (G42666HT) | |||
4 | C | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 1 | In PDB GlyTouCan (G22768VO) | |||
5 | A, B | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 4 | Chemie (NAG) |
Sequence modifications
A: 21 - 615 (UniProt: A0A7J7V5I6)
PDB | External Database | Details |
---|---|---|
Glu 24 | Gly 24 | conflict |
Asp 28 | Glu 28 | conflict |
Glu 36 | Lys 36 | conflict |
Glu 58 | Lys 58 | conflict |
Arg 80 | Leu 80 | conflict |
Asn 91 | Asp 91 | conflict |
Leu 92 | Ser 92 | conflict |
Glu 197 | Lys 197 | conflict |
Gly 211 | Trp 211 | conflict |
Glu 212 | Gly 212 | conflict |
Gln 221 | His 221 | conflict |
Glu 305 | Asp 305 | conflict |
Tyr 321 | Arg 321 | conflict |
Ser 322 | Asn 322 | conflict |
Gln 325 | Pro 325 | conflict |
Asn 330 | Lys 330 | conflict |
Glu 353 | Lys 353 | conflict |
Asn 432 | Leu 432 | conflict |
Ile 436 | Lys 436 | conflict |
Glu 536 | Gln 536 | conflict |
Tyr 568 | Leu 568 | conflict |
Asn 571 | Glu 571 | conflict |
Arg 575 | Gly 575 | conflict |
Lys 597 | Glu 597 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 92471.9 | |
Branched | Number of molecules | 4 |
Total formula weight | 2184.0 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 884.8 | |
All* | Total formula weight | 95540.8 |