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7WK0

Local refine of Omicron spike bitrimer with 6m6 antibody

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, D6m6 heavy chainpolymer22624096.82Homo sapiens (human)
2B, E6m6 light chainpolymer21422822.12Homo sapiens (human)
3C, FSpike protein S1polymer19822523.52UniProt (P0DTC2)
Pfam (PF09408)
In PDB
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV SARS-CoV-2)
4C, F2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.22Chemie (NAG)
Sequence modifications
C, F: 331 - 528 (UniProt: P0DTC2)
PDBExternal DatabaseDetails
Asp 339Gly 339variant
Leu 371Ser 371variant
Pro 373Ser 373variant
Phe 375Ser 375variant
Asn 417Lys 417variant
Lys 440Asn 440variant
Ser 446Gly 446variant
Asn 477Ser 477variant
Lys 478Thr 478variant
Ala 484Glu 484variant
Arg 493Gln 493variant
Ser 496Gly 496variant
Arg 498Gln 498variant
Tyr 501Asn 501variant
His 505Tyr 505variant
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight138884.8
Non-Polymers*Number of molecules2
Total formula weight442.4
All*Total formula weight139327.3
*Water molecules are not included.

225946

PDB entries from 2024-10-09

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