7WBH
overall structure of hu33 and spike
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | Spike glycoprotein | polymer | 1120 | 124062.6 | 1 | UniProt (P0DTC2) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) In PDB | Severe acute respiratory syndrome-related coronavirus | S glycoprotein,E2,Peplomer protein |
| 2 | B, C | Spike glycoprotein | polymer | 1120 | 123967.5 | 2 | UniProt (P0DTC2) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) In PDB | Severe acute respiratory syndrome-related coronavirus | S glycoprotein,E2,Peplomer protein |
| 3 | U, O, P | heavy chain of hu33 | polymer | 118 | 13162.6 | 3 | Homo sapiens | ||
| 4 | V, Q, S | light chain of hu33 | polymer | 107 | 11717.0 | 3 | Homo sapiens | ||
| 5 | D, E, F | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 3 | In PDB GlyTouCan (G15407YE) | |||
| 6 | G, H, I, J, K... | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 10 | In PDB GlyTouCan (G42666HT) | |||
| 7 | A, B, C, S | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 26 | Chemie (NAG) |
Sequence modifications
A: 27 - 1146 (UniProt: P0DTC2)
B, C: 27 - 1146 (UniProt: P0DTC2)
| PDB | External Database | Details |
|---|---|---|
| His 142 | Gly 142 | conflict |
| Gly 155 | Ser 155 | conflict |
| Gly 215 | Asp 215 | conflict |
| Asn 417 | Lys 417 | conflict |
| Lys 484 | Glu 484 | conflict |
| Tyr 501 | Asn 501 | conflict |
| Gly 614 | Asp 614 | conflict |
| Val 701 | Ala 701 | conflict |
| Pro 817 | Phe 817 | conflict |
| Pro 892 | Ala 892 | conflict |
| Pro 899 | Ala 899 | conflict |
| Pro 942 | Ala 942 | conflict |
| Pro 986 | Lys 986 | conflict |
| Pro 987 | Val 987 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Ala 80 | Asp 80 | conflict |
| Gly 215 | Asp 215 | conflict |
| Asn 417 | Lys 417 | conflict |
| Lys 484 | Glu 484 | conflict |
| Tyr 501 | Asn 501 | conflict |
| Gly 614 | Asp 614 | conflict |
| Val 701 | Ala 701 | conflict |
| Pro 817 | Phe 817 | conflict |
| Pro 892 | Ala 892 | conflict |
| Pro 899 | Ala 899 | conflict |
| Pro 942 | Ala 942 | conflict |
| Pro 986 | Lys 986 | conflict |
| Pro 987 | Val 987 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 9 |
| Total formula weight | 446636.4 | |
| Branched | Number of molecules | 13 |
| Total formula weight | 6003.6 | |
| Non-Polymers* | Number of molecules | 26 |
| Total formula weight | 5751.4 | |
| All* | Total formula weight | 458391.5 |
