7VY1
Membrane arm of deactive state CI from Q10 dataset
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (Q) | NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial | polymer | 473 | 53735.8 | 1 | UniProt (F1S1A8) Pfam (PF00346) | Sus scrofa (pig) | NADH-ubiquinone oxidoreductase 49 kDa subunit,Complex I-49kD |
| 2 | B (S) | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 | polymer | 70 | 8088.4 | 1 | UniProt (K7GR43) Pfam (PF15879) | Sus scrofa (pig) | |
| 3 | C (U) | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 | polymer | 84 | 9225.6 | 1 | UniProt (F1RNI5) Pfam (PF14987) UniProt (by SIFTS) (A0A4X1VPG4) | Sus scrofa (pig) | |
| 4 | D (V) | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 | polymer | 141 | 14686.9 | 1 | UniProt (I3LGM4) Pfam (PF02466) | Sus scrofa (pig) | |
| 5 | E (W) | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 | polymer | 144 | 16911.6 | 1 | UniProt (F1S6Q1) Pfam (PF06212) UniProt (by SIFTS) (A0A8D1NRT6) | Sus scrofa (pig) | |
| 6 | F (X) | Acyl carrier protein | polymer | 156 | 17308.2 | 1 | UniProt (A0A287AAR5) Pfam (PF00550) | Sus scrofa (pig) | |
| 7 | G (Y) | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial | polymer | 105 | 11939.4 | 1 | UniProt (A0A4X1V766) Pfam (PF14813) | Sus scrofa (pig) | NADH-ubiquinone oxidoreductase AGGG subunit,Complex I-AGGG |
| 8 | H (Z) | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 | polymer | 98 | 11128.5 | 1 | UniProt (A0A287AS93) Pfam (PF08122) UniProt (by SIFTS) (A0A4X1VD84) | Sus scrofa (pig) | NADH-ubiquinone oxidoreductase B12 subunit,Complex I-B12 |
| 9 | I (a) | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial | polymer | 189 | 21587.0 | 1 | UniProt (F1SGC6) Pfam (PF09781) | Sus scrofa (pig) | |
| 10 | J (b) | NADH dehydrogenase 1 beta subcomplex 6 | polymer | 128 | 15603.2 | 1 | UniProt (Q2EN80) Pfam (PF09782) UniProt (by SIFTS) (A0A480KM09) | Sus scrofa (pig) | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 |
| 11 | K (c) | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial | polymer | 186 | 21702.5 | 1 | UniProt (F1RWL7) Pfam (PF05821) | Sus scrofa (pig) | Complex I-ASHI,NADH-ubiquinone oxidoreductase ASHI subunit |
| 12 | L (d) | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 | polymer | 176 | 20944.8 | 1 | UniProt (A0A4X1VYV0) Pfam (PF10249) UniProt (by SIFTS) (I3LDC3) | Sus scrofa (pig) | NADH-ubiquinone oxidoreductase PDSW subunit,Complex I-PDSW |
| 13 | M (e) | Complex I-ESSS | polymer | 154 | 17384.7 | 1 | UniProt (A0A287BMW6) Pfam (PF10183) | Sus scrofa (pig) | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11,mitochondrial,NADH-ubiquinone oxidoreductase ESSS subunit |
| 14 | N (f) | Complex I-KFYI | polymer | 76 | 8664.1 | 1 | UniProt (A1XQS6) | Sus scrofa (pig) | NADH dehydrogenase [ubiquinone] 1 subunit C1,mitochondrial,NADH-ubiquinone oxidoreductase KFYI subunit |
| 15 | O (g) | NADH dehydrogenase [ubiquinone] 1 subunit C2 | polymer | 122 | 14327.7 | 1 | UniProt (A0A480JRW3) Pfam (PF06374) | Sus scrofa (pig) | |
| 16 | P (h) | NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 | polymer | 106 | 12506.6 | 1 | UniProt (F1SV23) Pfam (PF10200) | Sus scrofa (pig) | |
| 17 | Q (i) | NADH-ubiquinone oxidoreductase chain 2 | polymer | 347 | 39077.5 | 1 | UniProt (O79875) Pfam (PF00361) Pfam (PF06444) | Sus scrofa (pig) | NADH dehydrogenase subunit 2 |
| 18 | R (j) | ND3 | polymer | 113 | 12798.3 | 1 | UniProt (O79880) Pfam (PF00507) | Sus scrofa (pig) | |
| 19 | S (k) | NADH-ubiquinone oxidoreductase chain 4L | polymer | 98 | 10827.3 | 1 | UniProt (P56632) Pfam (PF00420) | Sus scrofa (pig) | NADH dehydrogenase subunit 4L |
| 20 | T (l) | NADH-ubiquinone oxidoreductase chain 5 | polymer | 603 | 68267.0 | 1 | UniProt (Q71K68) Pfam (PF00662) Pfam (PF00361) Pfam (PF06455) UniProt (by SIFTS) (Q9TDR1) | Sus scrofa (pig) | |
| 21 | U (m) | NADH-ubiquinone oxidoreductase chain 6 | polymer | 175 | 19021.3 | 1 | UniProt (O79882) Pfam (PF00499) | Sus scrofa (pig) | NADH dehydrogenase subunit 6 |
| 22 | V (n) | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1 | polymer | 58 | 7044.3 | 1 | UniProt (F1SD73) Pfam (PF08040) UniProt (by SIFTS) (A0A8D2CGH8) | Sus scrofa (pig) | |
| 23 | W (o) | Complex I-B15 | polymer | 129 | 15117.4 | 1 | UniProt (A0A4X1T6M0) Pfam (PF07225) | Sus scrofa (pig) | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4,NADH-ubiquinone oxidoreductase B15 subunit |
| 24 | X (p) | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 | polymer | 179 | 21864.9 | 1 | UniProt (A0A4X1T0A8) Pfam (PF05347) UniProt (by SIFTS) (K7GSE5) | Sus scrofa (pig) | NADH-ubiquinone oxidoreductase B22 subunit,Complex I-B22 |
| 25 | Y (r) | NADH-ubiquinone oxidoreductase chain 4 | polymer | 459 | 51853.4 | 1 | UniProt (Q7IIB7) Pfam (PF01059) Pfam (PF00361) UniProt (by SIFTS) (O79881) | Sus scrofa (pig) | |
| 26 | Z (s) | NADH-ubiquinone oxidoreductase chain 1 | polymer | 318 | 35667.5 | 1 | UniProt (O79874) Pfam (PF00146) | Sus scrofa (pig) | NADH dehydrogenase subunit 1 |
| 27 | AA (u) | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 | polymer | 172 | 20064.1 | 1 | UniProt (F1SLR1) Pfam (PF06747) | Sus scrofa (pig) | |
| 28 | BA (v) | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 | polymer | 136 | 16356.7 | 1 | UniProt (F1SCH1) Pfam (PF05676) | Sus scrofa (pig) | Complex I-B18,NADH-ubiquinone oxidoreductase B18 subunit |
| 29 | CA (w) | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial | polymer | 357 | 40476.1 | 1 | UniProt (F1SIS9) Pfam (PF01712) | Sus scrofa (pig) | |
| 30 | DA, FA, JA, NA, OA... (U, W, b, i, j...) | 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine | non-polymer | 744.0 | 8 | Chemie (PEE) | |||
| 31 | EA, HA, LA, MA, RA... (V, a, g, i, l...) | CARDIOLIPIN | non-polymer | 1464.0 | 8 | Chemie (CDL) | |||
| 32 | GA (X) | S-[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] dodecanethioate | non-polymer | 540.7 | 1 | Chemie (8Q1) | |||
| 33 | IA, KA, PA, VA, WA (a, g, j, r) | (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL | non-polymer | 767.1 | 5 | Chemie (PLX) | |||
| 34 | YA (s) | Coenzyme Q10, (2Z,6E,10Z,14E,18E,22E,26Z)-isomer | non-polymer | 863.3 | 1 | Chemie (UQ) | |||
| 35 | AB (w) | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 1 | Chemie (ADP) |
Sequence modifications
e: 1 - 154 (UniProt: A0A287BMW6)
| PDB | External Database | Details |
|---|---|---|
| - | Cys 114 | deletion |
| - | Met 115 | deletion |
| - | Gly 116 | deletion |
| - | Cys 117 | deletion |
| - | Pro 118 | deletion |
| - | Arg 119 | deletion |
| - | Glu 120 | deletion |
| - | Trp 121 | deletion |
| - | Gly 122 | deletion |
| - | Gly 123 | deletion |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 29 |
| Total formula weight | 634180.5 | |
| Non-Polymers* | Number of molecules | 24 |
| Total formula weight | 23331.5 | |
| All* | Total formula weight | 657512.0 |
