7VLY
Cryo-EM structure of Listeria monocytogenes man-PTS complexed with pediocin PA-1
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, D, G (Y, C, F) | Mannose/fructose/sorbose family PTS transporter subunit IIC | polymer | 268 | 27377.6 | 3 | UniProt (S5LAD9) Pfam (PF03609) | Listeria monocytogenes | PTS mannose/fructose/sorbose transporter subunit IIC,PTS system mannose-specific transporter subunit IIC |
| 2 | B, E, H (Z, D, G) | PTS mannose family transporter subunit IID | polymer | 303 | 33402.2 | 3 | UniProt (A0A1E8EBU8) Pfam (PF03613) UniProt (by SIFTS) (Q8YAM0) | Listeria monocytogenes | PTS mannose/fructose/sorbose transporter family subunit IID |
| 3 | C, F, I (A, E, H) | Bacteriocin pediocin PA-1 | polymer | 47 | 5001.7 | 3 | UniProt (P29430) Pfam (PF01721) | Pediococcus acidilactici | Pediocin ACH |
| 4 | J, K, L (Z, D, G) | alpha-D-mannopyranose | non-polymer | 180.2 | 3 | Chemie (MAN) | |||
| 5 | M, N, O, P, Q... (Y, A, C, E, F...) | water | water | 18.0 | 30 | Chemie (HOH) |
Sequence modifications
Z, D, G: 1 - 303 (UniProt: A0A1E8EBU8)
A, E, H: 1 - 44 (UniProt: P29430)
| PDB | External Database | Details |
|---|---|---|
| Gln 237 | Glu 237 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Pro -2 | - | expression tag |
| His -1 | - | expression tag |
| Met 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 9 |
| Total formula weight | 197344.2 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 540.5 | |
| All* | Total formula weight | 197884.6 |
