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7VLY

Cryo-EM structure of Listeria monocytogenes man-PTS complexed with pediocin PA-1

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1Y, C, FMannose/fructose/sorbose family PTS transporter subunit IICpolymer26827377.63UniProt (S5LAD9)
Pfam (PF03609)
In PDB
Listeria monocytogenesPTS mannose/fructose/sorbose transporter subunit IIC,PTS system mannose-specific transporter subunit IIC
2Z, D, GPTS mannose family transporter subunit IIDpolymer30333402.23UniProt (A0A1E8EBU8)
Pfam (PF03613)
UniProt (by SIFTS) (Q8YAM0)
In PDB
Listeria monocytogenesPTS mannose/fructose/sorbose transporter family subunit IID
3A, E, HBacteriocin pediocin PA-1polymer475001.73UniProt (P29430)
Pfam (PF01721)
In PDB
Pediococcus acidilacticiPediocin ACH
4Z, D, Galpha-D-mannopyranosenon-polymer180.23Chemie (MAN)
5waterwater18.030Chemie (HOH)
Sequence modifications
Z, D, G: 1 - 303 (UniProt: A0A1E8EBU8)
PDBExternal DatabaseDetails
Gln 237Glu 237conflict
A, E, H: 1 - 44 (UniProt: P29430)
PDBExternal DatabaseDetails
Pro -2-expression tag
His -1-expression tag
Met 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains9
Total formula weight197344.2
Non-Polymers*Number of molecules3
Total formula weight540.5
All*Total formula weight197884.6
*Water molecules are not included.

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PDB entries from 2024-07-10

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