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7VIX

class II photolyase MmCPDII oxidized to semiquinone TR-SFX studies (10 ns time-point)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA photolyasepolymer48255123.51UniProt (Q8PYK9)
Pfam (PF00875)
Methanosarcina mazei Go1 (Methanosarcina frisia)Deoxyribodipyrimidine photo-lyase
2B, C
(A)
SULFATE IONnon-polymer96.12Chemie (SO4)
3D
(A)
FLAVIN-ADENINE DINUCLEOTIDEnon-polymer785.51Chemie (FAD)
4E
(A)
waterwater18.0113Chemie (HOH)
Sequence modifications
A: 3 - 464 (UniProt: Q8PYK9)
PDBExternal DatabaseDetails
Met -17-initiating methionine
Gly -16-expression tag
Ser -15-expression tag
Ser -14-expression tag
His -13-expression tag
His -12-expression tag
His -11-expression tag
His -10-expression tag
His -9-expression tag
His -8-expression tag
Ser -7-expression tag
Ser -6-expression tag
Gly -5-expression tag
Leu -4-expression tag
Val -3-expression tag
Pro -2-expression tag
Arg -1-expression tag
Gly 0-expression tag
Ser 1-expression tag
His 2-expression tag
Thr 377Met 377engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight55123.5
Non-Polymers*Number of molecules3
Total formula weight977.7
All*Total formula weight56101.2
*Water molecules are not included.

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PDB entries from 2024-10-30

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