7VG2
Cryo-EM structure of Arabidopsis DCL3 in complex with a 40-bp RNA
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Dicer-like 3 | polymer | 1621 | 182176.8 | 1 | UniProt (F4J0I5) Pfam (PF00270) Pfam (PF00271) Pfam (PF02170) Pfam (PF00636) UniProt (by SIFTS) (Q9LXW7) In PDB | Arabidopsis thaliana (Mouse-ear cress) | |
2 | C | TAS1a forward strand (5'-phosphorylation) | polymer | 40 | 12812.7 | 1 | Arabidopsis thaliana | ||
3 | D | TAS1a reverse strand | polymer | 41 | 13042.7 | 1 | Arabidopsis thaliana | ||
4 | A | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
5 | A | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) |
Sequence modifications
A: 1 - 1570 (UniProt: F4J0I5)
PDB | External Database | Details |
---|---|---|
Met -50 | - | initiating methionine |
Trp -49 | - | expression tag |
Ser -48 | - | expression tag |
His -47 | - | expression tag |
Pro -46 | - | expression tag |
Gln -45 | - | expression tag |
Phe -44 | - | expression tag |
Glu -43 | - | expression tag |
Lys -42 | - | expression tag |
Gly -41 | - | expression tag |
Gly -40 | - | expression tag |
Gly -39 | - | expression tag |
Ala -38 | - | expression tag |
Arg -37 | - | expression tag |
Gly -36 | - | expression tag |
Gly -35 | - | expression tag |
Ser -34 | - | expression tag |
Gly -33 | - | expression tag |
Gly -32 | - | expression tag |
Gly -31 | - | expression tag |
Ser -30 | - | expression tag |
Trp -29 | - | expression tag |
Ser -28 | - | expression tag |
His -27 | - | expression tag |
Pro -26 | - | expression tag |
Gln -25 | - | expression tag |
Phe -24 | - | expression tag |
Glu -23 | - | expression tag |
Lys -22 | - | expression tag |
Gly -21 | - | expression tag |
Phe -20 | - | expression tag |
Asp -19 | - | expression tag |
Tyr -18 | - | expression tag |
Lys -17 | - | expression tag |
Asp -16 | - | expression tag |
Asp -15 | - | expression tag |
Asp -14 | - | expression tag |
Asp -13 | - | expression tag |
Lys -12 | - | expression tag |
Gly -11 | - | expression tag |
Ser -10 | - | expression tag |
Gly -9 | - | expression tag |
Ser -8 | - | expression tag |
Glu -7 | - | expression tag |
Asn -6 | - | expression tag |
Leu -5 | - | expression tag |
Tyr -4 | - | expression tag |
Phe -3 | - | expression tag |
Gln -2 | - | expression tag |
Gly -1 | - | expression tag |
Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 208032.1 | |
Non-Polymers* | Number of molecules | 3 |
Total formula weight | 145.6 | |
All* | Total formula weight | 208177.7 |