7VF3
Plexin B1 extracellular fragment in complex with lasso-grafted PB1m7 peptide
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C | Plexin-B1 | polymer | 525 | 56661.4 | 2 | UniProt (O43157) Pfam (PF01403) Pfam (PF01437) In PDB | Homo sapiens (Human) | Semaphorin receptor SEP |
2 | B, D | Uteroglobin,PB1m7 peptide,Uteroglobin | polymer | 155 | 17477.0 | 2 | UniProt (P11684) Pfam (PF01099) In PDB | Homo sapiens (Human) | Clara cell phospholipid-binding protein,CCPBP,Clara cells 10 kDa secretory protein,CC10,Secretoglobin family 1A member 1,Urinary protein 1,UP-1,UP1,Urine protein 1 |
3 | A, C | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
4 | A | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
5 | C | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 1 | Chemie (PGE) | |||
6 | C | TETRAETHYLENE GLYCOL | non-polymer | 194.2 | 4 | Chemie (PG4) | |||
7 | water | water | 18.0 | 146 | Chemie (HOH) |
Sequence modifications
A, C: 19 - 535 (UniProt: O43157)
B, D: 29 - 97 (UniProt: P11684)
B, D: 98 - 116 (PDB: 7VF3)
B, D: 117 - 183 (UniProt: P11684)
PDB | External Database | Details |
---|---|---|
Ser 19 | Thr 19 | engineered mutation |
Thr 536 | - | expression tag |
Arg 537 | - | expression tag |
Glu 538 | - | expression tag |
Asn 539 | - | expression tag |
Leu 540 | - | expression tag |
Tyr 541 | - | expression tag |
Phe 542 | - | expression tag |
Gln 543 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ser 29 | Ala 21 | engineered mutation |
B, D: 117 - 183 (UniProt: P11684)
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 148276.8 | |
Non-Polymers* | Number of molecules | 8 |
Total formula weight | 1475.6 | |
All* | Total formula weight | 149752.4 |