7VDP
The structure of cyclin-dependent kinase 5 (CDK5) in complex with p25 and Compound 1
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Cyclin-dependent-like kinase 5 | polymer | 292 | 33306.3 | 2 | UniProt (Q00535) Pfam (PF00069) In PDB | Homo sapiens (Human) | Cell division protein kinase 5 |
2 | C, D | Cyclin-dependent kinase 5 activator 1, p25 | polymer | 209 | 23331.9 | 2 | UniProt (Q15078) Pfam (PF03261) In PDB | Homo sapiens (Human) | |
3 | A, B | [1-[3-fluoranyl-4-[(2-piperidin-4-yloxy-1,6-naphthyridin-7-yl)amino]phenyl]pyrazol-3-yl]methanol | non-polymer | 434.5 | 2 | Chemie (65L) | |||
4 | A, C | 1,2-ETHANEDIOL | non-polymer | 62.1 | 10 | Chemie (EDO) | |||
5 | A | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 2 | Chemie (PEG) | |||
6 | A, C | CHLORIDE ION | non-polymer | 35.5 | 7 | Chemie (CL) | |||
7 | A | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
8 | water | water | 18.0 | 372 | Chemie (HOH) |
Sequence modifications
A, B: 2 - 292 (UniProt: Q00535)
C, D: 100 - 307 (UniProt: Q15078)
PDB | External Database | Details |
---|---|---|
Ser 1 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met 99 | - | initiating methionine |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 113276.4 | |
Non-Polymers* | Number of molecules | 22 |
Total formula weight | 2042.1 | |
All* | Total formula weight | 115318.6 |