7VC0
Membrane arm of active state CI from Rotenone-NADH dataset
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | Q | NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial | polymer | 44 | 5124.7 | 1 | UniProt (A0A480JYS1) UniProt (by SIFTS) (F1S1A8) In PDB | Sus scrofa (pig) | NADH-ubiquinone oxidoreductase 49 kDa subunit,Complex I-49kD |
| 2 | S | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 | polymer | 70 | 8088.4 | 1 | UniProt (K7GR43) Pfam (PF15879) In PDB | Sus scrofa (pig) | NADH-ubiquinone oxidoreductase MWFE subunit,Complex I-MWFE |
| 3 | U | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 | polymer | 83 | 9094.4 | 1 | UniProt (A0A4X1VQ42) Pfam (PF14987) UniProt (by SIFTS) (A0A4X1VPG4) In PDB | Sus scrofa (pig) | NADH-ubiquinone oxidoreductase B9 subunit,Complex I-B9 |
| 4 | V | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 | polymer | 140 | 14555.7 | 1 | UniProt (I3LGM4) Pfam (PF02466) In PDB | Sus scrofa (pig) | NADH-ubiquinone oxidoreductase subunit B14.7,Complex I-B14.7 |
| 5 | W | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 | polymer | 113 | 13522.6 | 1 | UniProt (F1S6Q1) Pfam (PF06212) UniProt (by SIFTS) (A0A8D1NRT6) In PDB | Sus scrofa (pig) | NADH-ubiquinone oxidoreductase B16.6 subunit,Complex I-B16.6 |
| 6 | X | Acyl carrier protein, mitochondrial | polymer | 88 | 10133.6 | 1 | UniProt (D0G781) Pfam (PF00550) UniProt (by SIFTS) (A0A287AAR5) In PDB | Sus scrofa (pig) | |
| 7 | Y | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial | polymer | 67 | 8201.1 | 1 | UniProt (A0A4X1V766) Pfam (PF14813) UniProt (by SIFTS) (A0A5G2QW32) In PDB | Sus scrofa (pig) | NADH-ubiquinone oxidoreductase AGGG subunit,Complex I-AGGG |
| 8 | Z | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 | polymer | 80 | 9042.2 | 1 | UniProt (A0A287AS93) Pfam (PF08122) UniProt (by SIFTS) (A0A4X1VD84) In PDB | Sus scrofa (pig) | NADH-ubiquinone oxidoreductase B12 subunit,Complex I-B12 |
| 9 | a | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial | polymer | 138 | 16281.9 | 1 | UniProt (F1SGC6) Pfam (PF09781) In PDB | Sus scrofa (pig) | NADH-ubiquinone oxidoreductase SGDH subunit,Complex I-SGDH |
| 10 | b | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 | polymer | 126 | 15333.8 | 1 | UniProt (Q2EN80) Pfam (PF09782) UniProt (by SIFTS) (A0A480KM09) In PDB | Sus scrofa (pig) | NADH-ubiquinone oxidoreductase B17 subunit,Complex I-B17 |
| 11 | c | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial | polymer | 156 | 18608.8 | 1 | UniProt (F1RWL7) Pfam (PF05821) In PDB | Sus scrofa (pig) | Complex I-ASHI,NADH-ubiquinone oxidoreductase ASHI subunit |
| 12 | d | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 | polymer | 175 | 20813.6 | 1 | UniProt (A0A4X1VYV0) Pfam (PF10249) UniProt (by SIFTS) (I3LDC3) In PDB | Sus scrofa (pig) | NADH-ubiquinone oxidoreductase PDSW subunit,Complex I-PDSW |
| 13 | e | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial | polymer | 104 | 12311.7 | 1 | Pfam (PF10183) UniProt (by SIFTS) (A0A287BMW6) In PDB | Sus scrofa (Pig) | |
| 14 | f | NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial | polymer | 49 | 5881.8 | 1 | UniProt (A1XQS6) Pfam (PF15088) In PDB | Sus scrofa (pig) | NADH-ubiquinone oxidoreductase KFYI subunit,Complex I-KFYI |
| 15 | g | NADH dehydrogenase [ubiquinone] 1 subunit C2 | polymer | 122 | 14327.7 | 1 | UniProt (A0A480JRW3) Pfam (PF06374) In PDB | Sus scrofa (pig) | |
| 16 | h | NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 | polymer | 105 | 12375.4 | 1 | UniProt (F1SV23) Pfam (PF10200) In PDB | Sus scrofa (pig) | NADH-ubiquinone oxidoreductase 15 kDa subunit,Complex I-15 kDa |
| 17 | i | NADH-ubiquinone oxidoreductase chain 2 | polymer | 347 | 39077.5 | 1 | UniProt (O79875) Pfam (PF00361) Pfam (PF06444) In PDB | Sus scrofa (pig) | NADH dehydrogenase subunit 2 |
| 18 | j | NADH-ubiquinone oxidoreductase chain 3 | polymer | 115 | 12998.4 | 1 | UniProt (O79880) Pfam (PF00507) In PDB | Sus scrofa (pig) | NADH dehydrogenase subunit 3 |
| 19 | k | NADH-ubiquinone oxidoreductase chain 4L | polymer | 98 | 10827.3 | 1 | UniProt (P56632) Pfam (PF00420) In PDB | Sus scrofa (pig) | NADH dehydrogenase subunit 4L |
| 20 | l | NADH-ubiquinone oxidoreductase chain 5 | polymer | 606 | 68697.5 | 1 | UniProt (Q71K68) Pfam (PF00662) Pfam (PF00361) Pfam (PF06455) UniProt (by SIFTS) (Q9TDR1) In PDB | Sus scrofa (pig) | |
| 21 | m | NADH-ubiquinone oxidoreductase chain 6 | polymer | 175 | 19021.3 | 1 | UniProt (O79882) Pfam (PF00499) In PDB | Sus scrofa (pig) | NADH dehydrogenase subunit 6 |
| 22 | n | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1 | polymer | 56 | 6781.9 | 1 | UniProt (F1SD73) Pfam (PF08040) UniProt (by SIFTS) (A0A8D2CGH8) In PDB | Sus scrofa (pig) | NADH-ubiquinone oxidoreductase MNLL subunit,Complex I-MNLL |
| 23 | o | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 | polymer | 128 | 14986.2 | 1 | UniProt (A0A4X1T6M0) Pfam (PF07225) In PDB | Sus scrofa (pig) | NADH-ubiquinone oxidoreductase B15 subunit,Complex I-B15 |
| 24 | p | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 | polymer | 178 | 21733.7 | 1 | UniProt (A0A4X1T0A8) Pfam (PF05347) UniProt (by SIFTS) (K7GSE5) In PDB | Sus scrofa (pig) | NADH-ubiquinone oxidoreductase B22 subunit,Complex I-B22 |
| 25 | r | NADH-ubiquinone oxidoreductase chain 4 | polymer | 459 | 51853.4 | 1 | UniProt (Q7IIB7) Pfam (PF01059) Pfam (PF00361) UniProt (by SIFTS) (O79881) In PDB | Sus scrofa (pig) | |
| 26 | s | NADH-ubiquinone oxidoreductase chain 1 | polymer | 318 | 35667.5 | 1 | UniProt (O79874) Pfam (PF00146) In PDB | Sus scrofa (pig) | NADH dehydrogenase subunit 1 |
| 27 | u | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 | polymer | 171 | 19932.9 | 1 | UniProt (F1SLR1) Pfam (PF06747) In PDB | Sus scrofa (pig) | NADH-ubiquinone oxidoreductase 19 kDa subunit,Complex I-19kD |
| 28 | v | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 | polymer | 125 | 15386.7 | 1 | UniProt (F1SCH1) Pfam (PF05676) In PDB | Sus scrofa (pig) | NADH-ubiquinone oxidoreductase B18 subunit,Complex I-B18 |
| 29 | w | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial | polymer | 320 | 36792.7 | 1 | UniProt (F1SIS9) Pfam (PF01712) In PDB | Sus scrofa (pig) | |
| 30 | Q, U, W, j, l... | 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine | non-polymer | 744.0 | 7 | Chemie (PEE) | |||
| 31 | u, V, a, k, l... | CARDIOLIPIN | non-polymer | 1464.0 | 9 | Chemie (CDL) | |||
| 32 | X | S-[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] dodecanethioate | non-polymer | 540.7 | 1 | Chemie (8Q1) | |||
| 33 | e, g, j, n, r | (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL | non-polymer | 767.1 | 6 | Chemie (PLX) | |||
| 34 | s | Coenzyme Q10, (2Z,6E,10Z,14E,18E,22E,26Z)-isomer | non-polymer | 863.3 | 1 | Chemie (UQ) | |||
| 35 | w | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 1 | Chemie (ADP) | |||
| 36 | water | water | 18.0 | 424 | Chemie (HOH) |
Sequence modifications
v: 2 - 125 (UniProt: F1SCH1)
| PDB | External Database | Details |
|---|---|---|
| Myr 1 | - | acetylation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 29 |
| Total formula weight | 547454.3 | |
| Non-Polymers* | Number of molecules | 25 |
| Total formula weight | 24818.6 | |
| All* | Total formula weight | 572272.9 |
