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7VBZ

Matrix arm of active state CI from Rotenone-NADH dataset

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrialpolymer43347434.11UniProt (F1RVN1)
Pfam (PF01512)
Pfam (PF22461)
Pfam (PF10589)
UniProt (by SIFTS) (A0A4X1SZP7)
Sus scrofa (pig)
2B
(B)
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrialpolymer17620208.01UniProt (A0A287BDC0)
Pfam (PF12838)
Sus scrofa (pig)NADH-ubiquinone oxidoreductase 23 kDa subunit,Complex I-23kD
3C
(C)
NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrialpolymer15617875.01UniProt (I3LK43)
Pfam (PF01058)
UniProt (by SIFTS) (A0A8D1TL60)
Sus scrofa (pig)NADH-ubiquinone oxidoreductase 20 kDa subunit,Complex I-20kD
4D
(E)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6polymer11513813.01UniProt (A0A480VKQ8)
Pfam (PF05347)
UniProt (by SIFTS) (F1SJP6)
Sus scrofa (pig)
5E
(F)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2polymer869841.31UniProt (F1RGE3)
Pfam (PF05047)
Sus scrofa (pig)
6F
(G)
Acyl carrier protein, mitochondrialpolymer8810133.61UniProt (D0G781)
Pfam (PF00550)
UniProt (by SIFTS) (A0A287AAR5)
Sus scrofa (pig)
7G
(H)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5polymer11212949.11UniProt (A0A5G2RN85)Sus scrofa (pig)Complex I-13kD-B,NADH-ubiquinone oxidoreductase 13 kDa-B subunit,Complex I subunit B13
8H
(I)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7polymer11212517.41UniProt (A0A4X1VLA2)
Pfam (PF07347)
Sus scrofa (pig)NADH-ubiquinone oxidoreductase subunit B14.5a,Complex I-B14.5a
9I
(J)
NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 9, mitochondrialpolymer34238954.11UniProt (A0A480QJC4)
Pfam (PF01370)
UniProt (by SIFTS) (A0A287AE88)
Sus scrofa (pig)
10J
(K)
NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrialpolymer435193.71UniProt (A0A4X1TFI3)
Pfam (PF15880)
UniProt (by SIFTS) (I3LRR4)
Sus scrofa (pig)NADH-ubiquinone oxidoreductase 9 kDa subunit,Complex I-9kD
11K
(L)
NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrialpolymer12514442.41UniProt (G8IFA6)
Pfam (PF04800)
UniProt (by SIFTS) (A0A4X1SN37)
Sus scrofa (pig)Complex I-18 kDa,NADH-ubiquinone oxidoreductase 18 kDa subunit
12L
(M)
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrialpolymer69075770.81UniProt (F1SHD7)
Pfam (PF13510)
Pfam (PF10588)
Pfam (PF22117)
Pfam (PF22151)
Pfam (PF00384)
Pfam (PF09326)
UniProt (by SIFTS) (A0A4X1V1H9)
Sus scrofa (pig)
13M
(N)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12polymer14417031.21UniProt (F1SQP4)
Pfam (PF05071)
Sus scrofa (pig)
14N
(O)
NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrialpolymer21723826.31UniProt (A0A287BG40)
Pfam (PF01257)
Sus scrofa (pig)NADH-ubiquinone oxidoreductase 24 kDa subunit
15O
(P)
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrialpolymer20824521.71UniProt (A0A286ZNN4)
Pfam (PF00329)
Sus scrofa (pig)NADH-ubiquinone oxidoreductase 30 kDa subunit,Complex I-30kD
16P
(Q)
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrialpolymer38644127.71UniProt (A0A480JYS1)
Pfam (PF00346)
UniProt (by SIFTS) (F1S1A8)
Sus scrofa (pig)NADH-ubiquinone oxidoreductase 49 kDa subunit,Complex I-49kD
17Q
(T)
NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrialpolymer9610567.61UniProt (F1S031)
Pfam (PF10276)
Sus scrofa (pig)
18R
(W)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13polymer293204.71UniProt (F1S6Q1)
UniProt (by SIFTS) (A0A8D1NRT6)
Sus scrofa (pig)NADH-ubiquinone oxidoreductase B16.6 subunit,Complex I-B16.6
19DA, EA, S, V, W...
(M, A, B, C)
IRON/SULFUR CLUSTERnon-polymer351.66Chemie (SF4)
20T
(A)
FLAVIN MONONUCLEOTIDEnon-polymer456.31Chemie (FMN)
21U
(A)
1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDEnon-polymer665.41Chemie (NAI)
22Y
(C)
1,2-dioleoyl-sn-glycero-3-phosphoethanolaminenon-polymer744.01Chemie (PEE)
23Z
(C)
(9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOLnon-polymer767.11Chemie (PLX)
24AA
(G)
S-[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] dodecanethioatenon-polymer540.71Chemie (8Q1)
25BA
(J)
NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATEnon-polymer745.41Chemie (NDP)
26CA
(J)
Coenzyme Q10, (2Z,6E,10Z,14E,18E,22E,26Z)-isomernon-polymer863.31Chemie (UQ)
27FA, IA
(M, O)
FE2/S2 (INORGANIC) CLUSTERnon-polymer175.82Chemie (FES)
28GA
(M)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
29HA
(N)
CARDIOLIPINnon-polymer1464.01Chemie (CDL)
30JA
(Q)
(2R,6aS,12aS)-8,9-dimethoxy-2-(prop-1-en-2-yl)-1,2,12,12a-tetrahydrofuro[2',3':7,8][1]benzopyrano[2,3-c][1]benzopyran-6(6aH)-onenon-polymer394.41Chemie (970)
31KA
(T)
ZINC IONnon-polymer65.41Chemie (ZN)
32AB, BB, LA, MA, NA...
(T, W, A, B, C...)
waterwater18.0730Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains18
Total formula weight402411.5
Non-Polymers*Number of molecules19
Total formula weight9192.0
All*Total formula weight411603.6
*Water molecules are not included.

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PDB entries from 2025-07-09

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