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7VB6

Crystal structure of hydroxynitrile lyase from Linum usitatissium complexed with (R)-2-hydroxy-2-methylbutanenitrile

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
Aliphatic (R)-hydroxynitrile lyasepolymer44348167.24UniProt (P93243)
Pfam (PF08240)
Pfam (PF00107)
Linum usitatissimum (flax)LuHNL
2CA, E, HA, S
(C, A, D, B)
NICOTINAMIDE-ADENINE-DINUCLEOTIDEnon-polymer663.44Chemie (NAD)
3DA, EA, F, G, IA...
(C, A, D, B)
ZINC IONnon-polymer65.48Chemie (ZN)
4FA, H, KA, V
(C, A, D, B)
MAGNESIUM IONnon-polymer24.34Chemie (MG)
5GA, I, LA, W
(C, A, D, B)
(2R)-2-methyl-2-oxidanyl-butanenitrilenon-polymer99.14Chemie (5Z9)
6J, K, L, M, MA...
(A, D, B)
1,2-ETHANEDIOLnon-polymer62.18Chemie (EDO)
7AA, BA, O, Z
(B, A)
GLYCEROLnon-polymer92.14Chemie (GOL)
8NA, P, Q, R
(D, A)
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOLnon-polymer209.24Chemie (BTB)
9OA, PA, QA, RA
(A, B, C, D)
waterwater18.01422Chemie (HOH)
Sequence modifications
A, B, C, D: 1 - 422 (UniProt: P93243)
PDBExternal DatabaseDetails
Met -20-initiating methionine
Gly -19-expression tag
Ser -18-expression tag
Ser -17-expression tag
His -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
His -11-expression tag
Ser -10-expression tag
Ser -9-expression tag
Gly -8-expression tag
Leu -7-expression tag
Val -6-expression tag
Pro -5-expression tag
Arg -4-expression tag
Gly -3-expression tag
Ser -2-expression tag
His -1-expression tag
Met 0-expression tag
Thr 117Val 117conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight192668.8
Non-Polymers*Number of molecules36
Total formula weight5372.6
All*Total formula weight198041.4
*Water molecules are not included.

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PDB entries from 2025-06-18

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