7VB5
Crystal structure of hydroxynitrile lyase from Linum usitatissimum complexed with acetone cyanohydrin
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Aliphatic (R)-hydroxynitrile lyase | polymer | 443 | 48167.2 | 4 | UniProt (P93243) Pfam (PF08240) Pfam (PF00107) | Linum usitatissimum (flax) | LuHNL |
| 2 | BB, E, TA, W (D, A, C, B) | NICOTINAMIDE-ADENINE-DINUCLEOTIDE | non-polymer | 663.4 | 4 | Chemie (NAD) | |||
| 3 | CB, DB, F, G, UA... (D, A, C, B) | ZINC ION | non-polymer | 65.4 | 8 | Chemie (ZN) | |||
| 4 | H, WA, Z (A, C, B) | 2-HYDROXY-2-METHYLPROPANENITRILE | non-polymer | 85.1 | 3 | Chemie (CNH) | |||
| 5 | AA, EB, I, XA (B, D, A, C) | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) | |||
| 6 | AB, BA, CA, DA, EA... (C, B, D, A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 28 | Chemie (EDO) | |||
| 7 | R, RA, S, T, U (A, B) | GLYCEROL | non-polymer | 92.1 | 5 | Chemie (GOL) | |||
| 8 | SA, V (B, A) | 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | non-polymer | 209.2 | 2 | Chemie (BTB) | |||
| 9 | GB (D) | ACETONE | non-polymer | 58.1 | 1 | Chemie (ACN) | |||
| 10 | HB, IB, JB, KB (A, B, C, D) | water | water | 18.0 | 1137 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 422 (UniProt: P93243)
| PDB | External Database | Details |
|---|---|---|
| Met -20 | - | initiating methionine |
| Gly -19 | - | expression tag |
| Ser -18 | - | expression tag |
| Ser -17 | - | expression tag |
| His -16 | - | expression tag |
| His -15 | - | expression tag |
| His -14 | - | expression tag |
| His -13 | - | expression tag |
| His -12 | - | expression tag |
| His -11 | - | expression tag |
| Ser -10 | - | expression tag |
| Ser -9 | - | expression tag |
| Gly -8 | - | expression tag |
| Leu -7 | - | expression tag |
| Val -6 | - | expression tag |
| Pro -5 | - | expression tag |
| Arg -4 | - | expression tag |
| Gly -3 | - | expression tag |
| Ser -2 | - | expression tag |
| His -1 | - | expression tag |
| Met 0 | - | expression tag |
| Thr 117 | Val 117 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 192668.8 | |
| Non-Polymers* | Number of molecules | 55 |
| Total formula weight | 6204.4 | |
| All* | Total formula weight | 198873.2 |






