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7V4E

Crystal Structure of VpsR display novel dimeric architecture and c-di-GMP binding: mechanistic implications in oligomerization, ATPase activity and DNA binding.

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, D)
VpsRpolymer39944722.12UniProt (Q9AQ41)
Pfam (PF20161)
Pfam (PF00158)
UniProt (by SIFTS) (Q9KU59)
Vibrio cholerae
2C, D
(A, D)
SULFATE IONnon-polymer96.12Chemie (SO4)
3E, F
(D)
9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)non-polymer690.42Chemie (C2E)
Sequence modifications
A, D: 1 - 382 (UniProt: Q9AQ41)
PDBExternal DatabaseDetails
His -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
His -11-expression tag
Ser -10-expression tag
Ser -9-expression tag
Gly -8-expression tag
Leu -7-expression tag
Val -6-expression tag
Pro -5-expression tag
Arg -4-expression tag
Gly -3-expression tag
Ser -2-expression tag
His -1-expression tag
Met 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight89444.2
Non-Polymers*Number of molecules4
Total formula weight1572.9
All*Total formula weight91017.2
*Water molecules are not included.

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PDB entries from 2025-06-18

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