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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

7US6

Structure of the human coronavirus CCoV-HuPn-2018 spike glycoprotein with domain 0 in the proximal conformation

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)		Spike glycoproteinpolymer1295142666.43UniProt (A0A8E6CMP0)
Pfam (PF01600)
Pfam (PF19209)
Pfam (PF01601)		unidentified human coronavirusS glycoprotein,E2,Peplomer protein
2AA, BA, CA, D, F...
(a, b, c, D, F...)		2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.420In PDB
GlyTouCan (G42666HT)
3E, N, V
(E, N, V)		alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched910.83In PDB
GlyTouCan (G22768VO)
4H, Q, Y
(H, Q, Y)		alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranosebranched504.43In PDB
GlyTouCan (G72618IM)
5AB, BB, CB, DA, DB...
(B, A, C)		2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.243Chemie (NAG)
Sequence modifications
A, B, C: 205 - 1392 (UniProt: A0A8E6CMP0)
PDBExternal DatabaseDetails
His 32-expression tag
Trp 33-expression tag
Asn 34-expression tag
Leu 35-expression tag
Ile 36-expression tag
Glu 37-expression tag
Asn 38-expression tag
Phe 39-expression tag
Leu 40-expression tag
Leu 41-expression tag
Asn 42-expression tag
Tyr 43-expression tag
Ser 44-expression tag
Ile 45-expression tag
Arg 46-expression tag
Leu 47-expression tag
Pro 48-expression tag
Pro 49-expression tag
Asn 50-expression tag
Ser 51-expression tag
Asp 52-expression tag
Val 53-expression tag
Val 54-expression tag
Leu 55-expression tag
Gly 56-expression tag
Asp 57-expression tag
Tyr 58-expression tag
Phe 59-expression tag
Pro 60-expression tag
Thr 61-expression tag
Val 62-expression tag
Gln 190-expression tag
Pro 191-expression tag
Trp 192-expression tag
Phe 193-expression tag
Asn 194-expression tag
Cys 195-expression tag
Ile 196-expression tag
Arg 197-expression tag
Asn 198-expression tag
Asn 199-expression tag
Asn 200-expression tag
Asn 201-expression tag
Ser 202-expression tag
Leu 203-expression tag
Tyr 204-expression tag
Met 207Leu 207conflict
Glu 208Gly 208conflict
Asn 209Asp 209conflict
Leu 210Met 210conflict
Lys 211Arg 211conflict
Leu 213Thr 213conflict
Tyr 214Thr 214conflict
Trp 215Leu 215conflict
Asp 216Gln 216conflict
Tyr 217Thr 217conflict
Thr 219Gly 219conflict
Glu 220Ala 220conflict
Asn 221Leu 221conflict
Ile 222Val 222conflict
Thr 223Asp 223conflict
Ser 224Leu 224conflict
Asp 225Trp 225conflict
His 226Trp 226conflict
Arg 227Phe 227conflict
Gln 228Asn 228conflict
Pro 1140Glu 1140conflict
Pro 1141Leu 1141conflict
Ser 1388Trp 1388conflict
Gly 1389Pro 1389conflict
Gly 1390Trp 1390conflict
Ile 1392Val 1392conflict
Pro 1393-expression tag
Glu 1394-expression tag
Ala 1395-expression tag
Pro 1396-expression tag
Arg 1397-expression tag
Asp 1398-expression tag
Gly 1399-expression tag
Gln 1400-expression tag
Ala 1401-expression tag
Tyr 1402-expression tag
Val 1403-expression tag
Arg 1404-expression tag
Lys 1405-expression tag
Asp 1406-expression tag
Gly 1407-expression tag
Glu 1408-expression tag
Trp 1409-expression tag
Val 1410-expression tag
Leu 1411-expression tag
Leu 1412-expression tag
Ser 1413-expression tag
Thr 1414-expression tag
Phe 1415-expression tag
Leu 1416-expression tag
Val 1417-expression tag
Pro 1418-expression tag
Arg 1419-expression tag
Gly 1420-expression tag
Ser 1421-expression tag
Gly 1422-expression tag
Gly 1423-expression tag
Ser 1424-expression tag
Gly 1425-expression tag
Gly 1426-expression tag
Ser 1427-expression tag
Gly 1428-expression tag
Leu 1429-expression tag
Asn 1430-expression tag
Asp 1431-expression tag
Ile 1432-expression tag
Phe 1433-expression tag
Glu 1434-expression tag
Ala 1435-expression tag
Gln 1436-expression tag
Lys 1437-expression tag
Ile 1438-expression tag
Glu 1439-expression tag
Trp 1440-expression tag
His 1441-expression tag
Glu 1442-expression tag
Gly 1443-expression tag
Gly 1444-expression tag
Ser 1445-expression tag
His 1446-expression tag
His 1447-expression tag
His 1448-expression tag
His 1449-expression tag
His 1450-expression tag
His 1451-expression tag
His 1452-expression tag
His 1453-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight427999.2
BranchedNumber of molecules26
Total formula weight12733.8
Non-Polymers*Number of molecules43
Total formula weight9511.9
All*Total formula weight450244.9
*Water molecules are not included.

246905

PDB entries from 2025-12-31

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