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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

7UIF

Mediator-PIC Early (Core B)

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, zDNA-directed RNA polymerase II subunit RPB1polymer1733191821.62UniProt (P04050)
Pfam (PF04997)
Pfam (PF05001)
Pfam (PF00623)
Pfam (PF04983)
Pfam (PF05000)
Pfam (PF04998)
Pfam (PF04992)
Pfam (PF04990)
In PDB		Saccharomyces cerevisiae S288CRNA polymerase II subunit B1,DNA-directed RNA polymerase III largest subunit,RNA polymerase II subunit B220
2BDNA-directed RNA polymerase II subunit RPB2polymer1224138937.31UniProt (P08518)
Pfam (PF04563)
Pfam (PF04561)
Pfam (PF04565)
Pfam (PF04566)
Pfam (PF04567)
Pfam (PF00562)
Pfam (PF04560)
In PDB		Saccharomyces cerevisiae S288CRNA polymerase II subunit 2,B150,DNA-directed RNA polymerase II 140 kDa polypeptide
3CDNA-directed RNA polymerase II subunit RPB3polymer31835330.51UniProt (P16370)
Pfam (PF01193)
Pfam (PF01000)
In PDB		Saccharomyces cerevisiae S288CRNA polymerase II subunit B3,B44.5,DNA-directed RNA polymerase II 45 kDa polypeptide
4DDNA-directed RNA polymerase II subunit RPB4polymer22125451.21UniProt (P20433)
Pfam (PF03874)
In PDB		Saccharomyces cerevisiae S288CRNA polymerase II subunit B4,B32,DNA-directed RNA polymerase II 32 kDa polypeptide
5EDNA-directed RNA polymerases I, II, and III subunit RPABC1polymer21525117.11UniProt (P20434)
Pfam (PF03871)
Pfam (PF01191)
In PDB		Saccharomyces cerevisiae S288CRNA polymerases I,II,and III subunit ABC1,ABC27,DNA-directed RNA polymerases I,and III 27 kDa polypeptide
6FDNA-directed RNA polymerases I, II, and III subunit RPABC2polymer15517931.81UniProt (P20435)
Pfam (PF01192)
In PDB		Saccharomyces cerevisiae S288CRNA polymerases I,II,and III subunit ABC2,ABC23,DNA-directed RNA polymerases I,and III 23 kDa polypeptide
7GDNA-directed RNA polymerase II subunit RPB7polymer17119081.11UniProt (P34087)
Pfam (PF03876)
Pfam (PF00575)
In PDB		Saccharomyces cerevisiae S288CRNA polymerase II subunit B7,B16
8HDNA-directed RNA polymerases I, II, and III subunit RPABC3polymer14616525.41UniProt (P20436)
Pfam (PF03870)
In PDB		Saccharomyces cerevisiae S288CRNA polymerases I,II,and III subunit ABC3,ABC14.4,ABC14.5,DNA-directed RNA polymerases I,and III 14.5 kDa polypeptide
9IDNA-directed RNA polymerase II subunit RPB9polymer12214308.21UniProt (P27999)
Pfam (PF02150)
Pfam (PF01096)
In PDB		Saccharomyces cerevisiae S288CRNA polymerase II subunit B9,B12.6,DNA-directed RNA polymerase II 14.2 kDa polypeptide,DNA-directed RNA polymerase II subunit 9
10JDNA-directed RNA polymerases I, II, and III subunit RPABC5polymer708290.71UniProt (P22139)
Pfam (PF01194)
In PDB		Saccharomyces cerevisiae S288CRNA polymerases I,II,and III subunit ABC5,ABC10-beta,ABC8,DNA-directed RNA polymerases I,and III 8.3 kDa polypeptide
11KDNA-directed RNA polymerase II subunit RPB11polymer12013633.51UniProt (P38902)
Pfam (PF13656)
In PDB		Saccharomyces cerevisiae S288CRNA polymerase II subunit B11,B13.6,DNA-directed RNA polymerase II 13.6 kDa polypeptide
12LDNA-directed RNA polymerases I, II, and III subunit RPABC4polymer707730.01UniProt (P40422)
Pfam (PF03604)
In PDB		Saccharomyces cerevisiae S288CRNA polymerases I,II,and III subunit ABC4,ABC10-alpha
13MTranscription initiation factor IIBpolymer34538257.31UniProt (P29055)
Pfam (PF08271)
Pfam (PF00382)
In PDB		Saccharomyces cerevisiae S288CGeneral transcription factor TFIIB,Transcription factor E
14PTranscription initiation factor IIF subunit alphapolymer73582320.61UniProt (P41895)
Pfam (PF05793)
In PDB		Saccharomyces cerevisiae S288CTFIIF-alpha,TFIIF large subunit,Transcription factor G 105 kDa subunit,P105
15QTranscription initiation factor IIF subunit betapolymer40046684.51UniProt (P41896)
Pfam (PF17683)
Pfam (PF02270)
In PDB		Saccharomyces cerevisiae S288CATP-dependent helicase TFG2,TFIIF medium subunit,TFIIF-beta,Transcription factor G 54 kDa subunit
16STranscription elongation factor S-IIpolymer30934903.61UniProt (P07273)
Pfam (PF08711)
Pfam (PF07500)
Pfam (PF01096)
In PDB		Saccharomyces cerevisiae S288CDNA strand transfer protein alpha,STP-alpha,DNA strand transferase 1,Pyrimidine pathway regulatory protein 2
17aMediator of RNA polymerase II transcription subunit 1polymer56664315.01UniProt (Q12321)
Pfam (PF10744)
In PDB		Saccharomyces cerevisiae S288CMediator complex subunit 1
18dMediator of RNA polymerase II transcription subunit 4polymer28432244.91UniProt (Q12343)
Pfam (PF10018)
In PDB		Saccharomyces cerevisiae S288CMediator complex subunit 4
19fMediator of RNA polymerase II transcription subunit 6polymer29532844.71UniProt (P38782)
Pfam (PF04934)
In PDB		Saccharomyces cerevisiae S288CMediator complex subunit 6
20gMediator of RNA polymerase II transcription subunit 7polymer22225616.11UniProt (Q08278)
Pfam (PF05983)
In PDB		Saccharomyces cerevisiae S288CMediator complex subunit 7
21hMediator of RNA polymerase II transcription subunit 8polymer22325297.21UniProt (P38304)
Pfam (PF10232)
In PDB		Saccharomyces cerevisiae S288CMediator complex subunit 8
22iMediator of RNA polymerase II transcription subunit 9polymer14917400.41UniProt (P33308)
Pfam (PF07544)
In PDB		Saccharomyces cerevisiae S288CChromosome segregation protein 2,Mediator complex subunit 9
23jMediator of RNA polymerase II transcription subunit 10polymer15717927.91UniProt (Q06213)
Pfam (PF09748)
In PDB		Saccharomyces cerevisiae S288CMediator complex subunit 10,Negative regulator of URS2 protein 2
24kMediator of RNA polymerase II transcription subunit 11polymer11513324.21UniProt (Q99278)
Pfam (PF10280)
In PDB		Saccharomyces cerevisiae S288CMediator complex subunit 11
25nMediator of RNA polymerase II transcription subunit 14polymer1082123500.71UniProt (P19263)
Pfam (PF08638)
In PDB		Saccharomyces cerevisiae S288CGlucose repression regulatory protein 1,Mediator complex subunit 14
26qMediator of RNA polymerase II transcription subunit 17polymer68778582.81UniProt (P32569)
Pfam (PF10156)
In PDB		Saccharomyces cerevisiae S288CMediator complex subunit 17,Suppressor of RNA polymerase B 4
27rMediator of RNA polymerase II transcription subunit 18polymer30734316.51UniProt (P32585)
Pfam (PF09637)
In PDB		Saccharomyces cerevisiae S288CMediator complex subunit 18,Suppressor of RNA polymerase B 5
28sMediator of RNA polymerase II transcription subunit 19polymer22024885.31UniProt (P25046)
Pfam (PF08633)
In PDB		Saccharomyces cerevisiae S288CHypoxic gene repressor protein 3,Mediator complex subunit 19,Negative regulator of URS2 protein 3,SNF1 suppressor protein 7
29tMediator of RNA polymerase II transcription subunit 20polymer21022918.11UniProt (P34162)
Pfam (PF08612)
In PDB		Saccharomyces cerevisiae S288CHyper-recombination suppressor protein 2,Mediator complex subunit 20,Suppressor of RNA polymerase B 2
30uMediator of RNA polymerase II transcription subunit 21polymer14016093.41UniProt (P47822)
Pfam (PF11221)
In PDB		Saccharomyces cerevisiae S288CMediator complex subunit 21,RNAPII complex component SRB7,Suppressor of RNA polymerase B 7
31vMediator of RNA polymerase II transcription subunit 22polymer12113875.71UniProt (P32570)
Pfam (PF06179)
In PDB		Saccharomyces cerevisiae S288CMediator complex subunit 22,Suppressor of RNA polymerase B 6
32wMediator of RNA polymerase II transcription subunit 31polymer12714747.71UniProt (P38633)
Pfam (PF05669)
In PDB		Saccharomyces cerevisiae S288CHpr1 suppressor protein 1,Mediator complex subunit 31
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains33
Total formula weight1466036.4
All*Total formula weight1466036.4
*Water molecules are not included.

224004

PDB entries from 2024-08-21

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