7TPS
Crystal structure of ALPN-202 (engineered CD80 vIgD) in complex with PD-L1
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C | T-lymphocyte activation antigen CD80 | polymer | 106 | 12245.2 | 2 | UniProt (P33681) Pfam (PF07686) In PDB | Homo sapiens (human) | Activation B7-1 antigen,BB1,CTLA-4 counter-receptor B7.1,B7 |
2 | B | Programmed cell death 1 ligand 1 | polymer | 209 | 24048.2 | 1 | UniProt (Q9NZQ7) Pfam (PF07686) Pfam (PF08205) In PDB | Homo sapiens (human) | PD-L1,PDCD1 ligand 1,Programmed death ligand 1,hPD-L1,B7 homolog 1,B7-H1 |
3 | D | Programmed cell death 1 ligand 1 | polymer | 209 | 23968.2 | 1 | UniProt (Q9NZQ7) Pfam (PF07686) Pfam (PF08205) In PDB | Homo sapiens (human) | PD-L1,PDCD1 ligand 1,Programmed death ligand 1,hPD-L1,B7 homolog 1,B7-H1 |
4 | E, G, H | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 3 | In PDB GlyTouCan (G21290RB) | |||
5 | F | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 1 | In PDB | |||
6 | A, B, C, D | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 6 | Chemie (NAG) | |||
7 | D | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
8 | water | water | 18.0 | 53 | Chemie (HOH) |
Sequence modifications
A, C: 35 - 140 (UniProt: P33681)
PDB | External Database | Details |
---|---|---|
Tyr 52 | His 52 | engineered mutation |
Glu 60 | Ala 60 | engineered mutation |
Asp 69 | Glu 69 | engineered mutation |
Leu 81 | Met 81 | engineered mutation |
Met 102 | Val 102 | engineered mutation |
Gly 105 | Ala 105 | engineered mutation |
Gly 124 | Asp 124 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 72506.7 | |
Branched | Number of molecules | 4 |
Total formula weight | 2282.2 | |
Non-Polymers* | Number of molecules | 7 |
Total formula weight | 1419.3 | |
All* | Total formula weight | 76208.2 |