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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

7TOO

Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A25S25S rRNApolymer33961097493.91GenBank (834774822)Saccharomyces cerevisiae (baker's yeast)
2A58S5.8S rRNApolymer15850682.91GenBank (1267176496)Saccharomyces cerevisiae (baker's yeast)
3A5S5S rRNApolymer12138951.11GenBank (1039024045)Saccharomyces cerevisiae (baker's yeast)
4AGRALS-FTD-associated dipeptide repeat protein, GR20polymer404302.91Homo sapiens
5AL0260S ribosomal protein L2-Apolymer25427463.61UniProt (P0CX45)
Pfam (PF00181)
Pfam (PF03947)
In PDB		Saccharomyces cerevisiae (baker's yeast)L5,Large ribosomal subunit protein uL2-A,RP8,YL6
6AL03RPL3 isoform 1polymer38743850.81UniProt (A0A6A5Q627)
Pfam (PF00297)
In PDB		Saccharomyces cerevisiae (baker's yeast)
7AL04RPL4A isoform 1polymer36239159.11UniProt (A0A6A5Q3W0)
Pfam (PF00573)
Pfam (PF14374)
In PDB		Saccharomyces cerevisiae (baker's yeast)
8AL05RPL5 isoform 1polymer29733764.81UniProt (A0A6A5Q0W8)
Pfam (PF17144)
Pfam (PF14204)
In PDB		Saccharomyces cerevisiae (baker's yeast)
9AL0660S ribosomal protein L6-Apolymer17620000.61UniProt (Q02326)
Pfam (PF01159)
In PDB		Saccharomyces cerevisiae (baker's yeast)L17,Large ribosomal subunit protein eL6-A,RP18,YL16
10AL0760S ribosomal protein L7-Apolymer24427686.31UniProt (P05737)
Pfam (PF00327)
Pfam (PF08079)
In PDB		Saccharomyces cerevisiae (baker's yeast)L6,Large ribosomal subunit protein uL30-A,RP11,YL8
11AL0860S ribosomal protein L8-Apolymer25628175.81UniProt (P17076)
Pfam (PF01248)
In PDB		Saccharomyces cerevisiae (baker's yeast)L4,L4-2,L7a-1,Large ribosomal subunit protein eL8-A,Maintenance of killer protein 7,RP6,YL5
12AL0960S ribosomal protein L9-Apolymer19121605.11UniProt (P05738)
Pfam (PF00347)
In PDB		Saccharomyces cerevisiae (baker's yeast)L8,Large ribosomal subunit protein uL6-A,RP24,YL11
13AL10RPL10 isoform 1polymer22125410.51UniProt (A0A6A5PUZ5)
Pfam (PF00252)
In PDB		Saccharomyces cerevisiae (baker's yeast)
14AL11RPL11A isoform 1polymer17419755.71UniProt (A0A6A5Q7I9)
Pfam (PF00281)
Pfam (PF00673)
In PDB		Saccharomyces cerevisiae (baker's yeast)
15AL12Ribosomal protein L12polymer15513209.31Saccharomyces cerevisiae (baker's yeast)
16AL1360S ribosomal protein L13-Apolymer19922604.21UniProt (Q12690)
Pfam (PF01294)
In PDB		Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein eL13-A
17AL1460S ribosomal protein L14-Apolymer13815195.11UniProt (P36105)
Pfam (PF00467)
Pfam (PF01929)
In PDB		Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein eL14-A
18AL1560S ribosomal protein L15-Apolymer20424482.41UniProt (P05748)
Pfam (PF00827)
In PDB		Saccharomyces cerevisiae (baker's yeast)L13,Large ribosomal subunit protein eL15-A,RP15R,YL10,YP18
19AL1660S ribosomal protein L16-Apolymer19922247.21UniProt (P26784)
Pfam (PF00572)
In PDB		Saccharomyces cerevisiae (baker's yeast)L13a,L21,Large ribosomal subunit protein uL13-A,RP22,YL15
20AL1760S ribosomal protein L17-Apolymer18420589.51UniProt (P05740)
Pfam (PF00237)
In PDB		Saccharomyces cerevisiae (baker's yeast)L20A,Large ribosomal subunit protein uL22-A,YL17
21AL1860S ribosomal protein L18-Apolymer18620609.31UniProt (P0CX49)
Pfam (PF17135)
In PDB		Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein eL18-A,RP28
22AL1960S ribosomal protein L19-Apolymer18921762.31UniProt (P0CX82)
Pfam (PF01280)
In PDB		Saccharomyces cerevisiae (baker's yeast)L23,Large ribosomal subunit protein eL19-A,RP15L,RP33,YL14
23AL2060S ribosomal protein L20-Apolymer17220478.91UniProt (P0CX23)
Pfam (PF01775)
In PDB		Saccharomyces cerevisiae (baker's yeast)L18a,Large ribosomal subunit protein eL20-A
24AL2160S ribosomal protein L21-Apolymer16018279.31UniProt (Q02753)
Pfam (PF01157)
In PDB		Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein eL21-A
25AL2260S ribosomal protein L22-Apolymer12113711.41UniProt (P05749)
Pfam (PF01776)
In PDB		Saccharomyces cerevisiae (baker's yeast)L1c,Large ribosomal subunit protein eL22-A,RP4,YL31
26AL2360S ribosomal protein L23-Apolymer13714494.01UniProt (P0CX41)
Pfam (PF00238)
In PDB		Saccharomyces cerevisiae (baker's yeast)L17a,Large ribosomal subunit protein uL14-A,YL32
27AL24RPL24A isoform 1polymer15517661.71UniProt (A0A6A5PY83)
Pfam (PF01246)
In PDB		Saccharomyces cerevisiae (baker's yeast)
28AL2560S ribosomal protein L25polymer14215787.61UniProt (P04456)
Pfam (PF03939)
Pfam (PF00276)
In PDB		Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein uL23,RP16L,YL25,YP42'
29AL2660S ribosomal protein L26-Apolymer12714265.81UniProt (P05743)
Pfam (PF16906)
Pfam (PF00467)
In PDB		Saccharomyces cerevisiae (baker's yeast)L33,Large ribosomal subunit protein uL24-A,YL33
30AL2760S ribosomal protein L27-Apolymer13615568.41UniProt (P0C2H6)
Pfam (PF01777)
In PDB		Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein eL27-A
31AL2860S ribosomal protein L28polymer14916761.71UniProt (P02406)
Pfam (PF00828)
In PDB		Saccharomyces cerevisiae (baker's yeast)L27a,L29,Large ribosomal subunit protein uL15,RP44,RP62,YL24
32AL29RPL29 isoform 1polymer596691.91UniProt (A0A6A5PWR1)
Pfam (PF01779)
In PDB		Saccharomyces cerevisiae (baker's yeast)
33AL3060S ribosomal protein L30polymer10511430.41UniProt (P14120)
Pfam (PF01248)
In PDB		Saccharomyces cerevisiae (baker's yeast)L32,Large ribosomal subunit protein eL30,RP73,YL38
34AL3160S ribosomal protein L31-Apolymer11312980.21UniProt (P0C2H8)
Pfam (PF01198)
In PDB		Saccharomyces cerevisiae (baker's yeast)L34,Large ribosomal subunit protein eL31-A,YL28
35AL32RPL32 isoform 1polymer13014809.41UniProt (A0A6A5Q1M9)
Pfam (PF01655)
In PDB		Saccharomyces cerevisiae (baker's yeast)
36AL3360S ribosomal protein L33-Apolymer10712177.11UniProt (P05744)
Pfam (PF01247)
In PDB		Saccharomyces cerevisiae (baker's yeast)L37,Large ribosomal subunit protein eL33-A,RP47,YL37
37AL3460S ribosomal protein L34-Apolymer12113673.21UniProt (P87262)
Pfam (PF01199)
In PDB		Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein eL34-A
38AL3560S ribosomal protein L35-Apolymer12013942.61UniProt (P0CX84)
Pfam (PF00831)
In PDB		Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein uL29-A
39AL3660S ribosomal protein L36-Apolymer10011151.31UniProt (P05745)
Pfam (PF01158)
In PDB		Saccharomyces cerevisiae (baker's yeast)L39,Large ribosomal subunit protein eL36-A,YL39
40AL3760S ribosomal protein L37-Apolymer889877.41UniProt (P49166)
Pfam (PF01907)
In PDB		Saccharomyces cerevisiae (baker's yeast)L43,Large ribosomal subunit protein eL37-A,YL35,YP55
41AL38RPL38 isoform 1polymer788845.61UniProt (A0A6A5PUL8)
Pfam (PF01781)
In PDB		Saccharomyces cerevisiae (baker's yeast)
42AL3960S ribosomal protein L39polymer516358.61UniProt (P04650)
Pfam (PF00832)
In PDB		Saccharomyces cerevisiae (baker's yeast)L46,Large ribosomal subunit protein eL39,YL40
43AL40Ubiquitin-60S ribosomal protein L40polymer12814583.11UniProt (P0CH08)
Pfam (PF00240)
Pfam (PF01020)
In PDB		Saccharomyces cerevisiae (baker's yeast)
44AL4160S ribosomal protein L41-Apolymer253354.21UniProt (P0CX86)
Pfam (PF05162)
In PDB		Saccharomyces cerevisiae (baker's yeast)L47,Large ribosomal subunit protein eL41-A,YL41
45AL4260S ribosomal protein L42-Apolymer10612246.71UniProt (P0CX27)
Pfam (PF00935)
In PDB		Saccharomyces cerevisiae (baker's yeast)L41,Large ribosomal subunit protein eL42-A,YL27,YP44
46AL4360S ribosomal protein L43-Apolymer9210113.01UniProt (P0CX25)
Pfam (PF01780)
In PDB		Saccharomyces cerevisiae (baker's yeast)L37a,Large ribosomal subunit protein eL43-A,YL35
47ALP060S acidic ribosomal protein P0polymer22123773.61UniProt (P05317)
Pfam (PF00466)
Pfam (PF17777)
In PDB		Saccharomyces cerevisiae (baker's yeast)A0,L10e,Large ribosomal subunit protein uL10
48APTNtRNAfMetpolymer7724802.81GenBank (1848934315)Escherichia coli
49AL37, AL40, AL42, AL43ZINC IONnon-polymer65.44Chemie (ZN)
Sequence modifications
ALP0: 1 - 198 (UniProt: P05317)
ALP0: 199 - 221 (PDB: 7TOO)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains48
Total formula weight1996821.7
Non-Polymers*Number of molecules4
Total formula weight261.6
All*Total formula weight1997083.4
*Water molecules are not included.

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PDB entries from 2024-07-24

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