7SK3
Cryo-EM structure of ACKR3 in complex with CXCL12, an intracellular Fab, and an extracellular Fab
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Atypical chemokine receptor 3 | polymer | 393 | 45196.4 | 1 | UniProt (P25106) Pfam (PF00001) In PDB | Homo sapiens (human) | C-X-C chemokine receptor type 7,CXC-R7,CXCR-7,Chemokine orphan receptor 1,G-protein coupled receptor 159,G-protein coupled receptor RDC1 homolog,RDC-1 |
2 | B | Stromal cell-derived factor 1 | polymer | 68 | 7978.5 | 1 | UniProt (P48061) Pfam (PF00048) In PDB | Homo sapiens (human) | hSDF-1,C-X-C motif chemokine 12,Intercrine reduced in hepatomas,hIRH,Pre-B cell growth-stimulating factor,PBSF |
3 | C | CID25 Fab light chain | polymer | 215 | 23531.1 | 1 | Homo sapiens | ||
4 | D | CID25 Fab heavy chain | polymer | 236 | 25461.4 | 1 | Homo sapiens | ||
5 | E | CID24 Fab light chain | polymer | 215 | 23471.0 | 1 | Homo sapiens | ||
6 | F | CID24 Fab heavy chain | polymer | 238 | 25380.2 | 1 | Homo sapiens | ||
7 | A | CHOLESTEROL | non-polymer | 386.7 | 8 | Chemie (CLR) |
Sequence modifications
A: 2 - 362 (UniProt: P25106)
PDB | External Database | Details |
---|---|---|
Gly -1 | - | cloning artifact |
Ala 0 | - | cloning artifact |
Pro 1 | - | cloning artifact |
Gly 363 | - | expression tag |
Arg 364 | - | expression tag |
Pro 365 | - | expression tag |
Leu 366 | - | expression tag |
Glu 367 | - | expression tag |
Val 368 | - | expression tag |
Leu 369 | - | expression tag |
Phe 370 | - | expression tag |
Gln 371 | - | expression tag |
Gly 372 | - | expression tag |
Pro 373 | - | expression tag |
His 374 | - | expression tag |
His 375 | - | expression tag |
His 376 | - | expression tag |
His 377 | - | expression tag |
His 378 | - | expression tag |
His 379 | - | expression tag |
His 380 | - | expression tag |
His 381 | - | expression tag |
His 382 | - | expression tag |
His 383 | - | expression tag |
Asp 384 | - | expression tag |
Tyr 385 | - | expression tag |
Lys 386 | - | expression tag |
Asp 387 | - | expression tag |
Asp 388 | - | expression tag |
Asp 389 | - | expression tag |
Asp 390 | - | expression tag |
Lys 391 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 151018.6 | |
Non-Polymers* | Number of molecules | 8 |
Total formula weight | 3093.2 | |
All* | Total formula weight | 154111.9 |