7SG2
XPA5 TCR in complex with HLA-DQ2-omega1
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, F) | HLA class II histocompatibility antigen, DQ alpha 1 chain | polymer | 183 | 20683.1 | 2 | UniProt (P01909) Pfam (PF00993) Pfam (PF07654) | Homo sapiens (Human) | DC-1 alpha chain,DC-alpha,HLA-DCA,MHC class II DQA1 |
| 2 | B, D (B, G) | MHC class II HLA-DQ-beta-1 | polymer | 205 | 23556.5 | 2 | UniProt (O19712) Pfam (PF00969) Pfam (PF07654) UniProt (by SIFTS) (Q5Y7D3) | Homo sapiens (Human) | |
| 3 | E, I (D, I) | T-cell receptor, xpa5, alpha chain | polymer | 203 | 22661.2 | 2 | Homo sapiens (Human) | ||
| 4 | F, J (E, J) | T-cell receptor, xpa5, beta chain | polymer | 246 | 27515.7 | 2 | Homo sapiens (Human) | ||
| 5 | G, H (C, H) | DQ2-glia-omega1 peptide | polymer | 13 | 1455.6 | 2 | Homo sapiens (Human) | ||
| 6 | K, O (A, F) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
| 7 | L, R, S (A, J) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 3 | Chemie (EDO) | |||
| 8 | M, P (A, F) | ACETATE ION | non-polymer | 59.0 | 2 | Chemie (ACT) | |||
| 9 | N, Q (B, E) | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
| 10 | T, U, V, W (A, B, F, E) | water | water | 18.0 | 7 | Chemie (HOH) |
Sequence modifications
B, G: 1 - 192 (UniProt: O19712)
| PDB | External Database | Details |
|---|---|---|
| Gly -12 | - | expression tag |
| Gly -11 | - | expression tag |
| Ser -10 | - | expression tag |
| Ile -9 | - | expression tag |
| Glu -8 | - | expression tag |
| Gly -7 | - | expression tag |
| Arg -6 | - | expression tag |
| Gly -5 | - | expression tag |
| Gly -4 | - | expression tag |
| Ser -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Ala -1 | - | expression tag |
| Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 10 |
| Total formula weight | 191744.1 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 826.9 | |
| All* | Total formula weight | 192571.0 |






