7SBY
Structure of OC43 spike in complex with polyclonal Fab7 (Donor 269)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | H, L | Human polyclonal Fab model with polyalanine backbone - Heavy chain | polymer | 126 | 10741.2 | 2 | Homo sapiens | ||
2 | J, A, B | Spike protein | polymer | 1367 | 151119.9 | 3 | UniProt (A0A7U1BGV5) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) UniProt (by SIFTS) (A0A0B4N7I3) In PDB | Human coronavirus OC43 (HCoV-OC43) | |
3 | C, E, F, G, I... | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 13 | In PDB GlyTouCan (G42666HT) | |||
4 | D, Q | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 2 | In PDB GlyTouCan (G15407YE) | |||
5 | J, A, B | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 25 | Chemie (NAG) | |||
6 | A, B | Sapienic acid | non-polymer | 254.4 | 3 | Chemie (8Z9) |
Sequence modifications
J, A, B: 1 - 1287 (UniProt: A0A7U1BGV5)
PDB | External Database | Details |
---|---|---|
His 177 | Leu 177 | conflict |
Ile 261 | Val 261 | conflict |
Pro 545 | Ser 545 | conflict |
Asn 762 | Thr 762 | conflict |
Pro 1079 | Ala 1079 | conflict |
Pro 1080 | Leu 1080 | conflict |
Met 1217 | Ile 1217 | conflict |
Phe 1269 | Leu 1269 | conflict |
Gly 1288 | - | expression tag |
Ser 1289 | - | expression tag |
Gly 1290 | - | expression tag |
Tyr 1291 | - | expression tag |
Ile 1292 | - | expression tag |
Pro 1293 | - | expression tag |
Glu 1294 | - | expression tag |
Ala 1295 | - | expression tag |
Pro 1296 | - | expression tag |
Arg 1297 | - | expression tag |
Asp 1298 | - | expression tag |
Gly 1299 | - | expression tag |
Gln 1300 | - | expression tag |
Ala 1301 | - | expression tag |
Tyr 1302 | - | expression tag |
Val 1303 | - | expression tag |
Arg 1304 | - | expression tag |
Lys 1305 | - | expression tag |
Asp 1306 | - | expression tag |
Gly 1307 | - | expression tag |
Glu 1308 | - | expression tag |
Trp 1309 | - | expression tag |
Val 1310 | - | expression tag |
Leu 1311 | - | expression tag |
Leu 1312 | - | expression tag |
Ser 1313 | - | expression tag |
Thr 1314 | - | expression tag |
Phe 1315 | - | expression tag |
Leu 1316 | - | expression tag |
Gly 1317 | - | expression tag |
Arg 1318 | - | expression tag |
Ser 1319 | - | expression tag |
Leu 1320 | - | expression tag |
Glu 1321 | - | expression tag |
Val 1322 | - | expression tag |
Leu 1323 | - | expression tag |
Phe 1324 | - | expression tag |
Gln 1325 | - | expression tag |
Gly 1326 | - | expression tag |
Pro 1327 | - | expression tag |
Gly 1328 | - | expression tag |
His 1329 | - | expression tag |
His 1330 | - | expression tag |
His 1331 | - | expression tag |
His 1332 | - | expression tag |
His 1333 | - | expression tag |
His 1334 | - | expression tag |
His 1335 | - | expression tag |
His 1336 | - | expression tag |
Ser 1337 | - | expression tag |
Ala 1338 | - | expression tag |
Trp 1339 | - | expression tag |
Ser 1340 | - | expression tag |
His 1341 | - | expression tag |
Pro 1342 | - | expression tag |
Gln 1343 | - | expression tag |
Phe 1344 | - | expression tag |
Glu 1345 | - | expression tag |
Lys 1346 | - | expression tag |
Gly 1347 | - | expression tag |
Gly 1348 | - | expression tag |
Gly 1349 | - | expression tag |
Ser 1350 | - | expression tag |
Gly 1351 | - | expression tag |
Gly 1352 | - | expression tag |
Gly 1353 | - | expression tag |
Gly 1354 | - | expression tag |
Ser 1355 | - | expression tag |
Gly 1356 | - | expression tag |
Gly 1357 | - | expression tag |
Ser 1358 | - | expression tag |
Ala 1359 | - | expression tag |
Trp 1360 | - | expression tag |
Ser 1361 | - | expression tag |
His 1362 | - | expression tag |
Pro 1363 | - | expression tag |
Gln 1364 | - | expression tag |
Phe 1365 | - | expression tag |
Glu 1366 | - | expression tag |
Lys 1367 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 5 |
Total formula weight | 474842.1 | |
Branched | Number of molecules | 15 |
Total formula weight | 6690.3 | |
Non-Polymers* | Number of molecules | 28 |
Total formula weight | 6293.4 | |
All* | Total formula weight | 487825.9 |