7S0T
Structure of DNA polymerase zeta with mismatched DNA
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | DNA polymerase zeta catalytic subunit | polymer | 1538 | 177068.5 | 1 | UniProt (P14284) Pfam (PF03104) Pfam (PF00136) Pfam (PF14260) In PDB | Saccharomyces cerevisiae (baker's yeast) | Protein reversionless 3 |
2 | D, E | DNA polymerase zeta processivity subunit | polymer | 245 | 28791.7 | 2 | UniProt (P38927) Pfam (PF02301) In PDB | Saccharomyces cerevisiae (baker's yeast) | Revertibility protein 7 |
3 | F | DNA polymerase delta small subunit | polymer | 494 | 55987.4 | 1 | UniProt (A0A6A5PTG9) Pfam (PF18018) Pfam (PF04042) UniProt (by SIFTS) (P46957) In PDB | Saccharomyces cerevisiae (baker's yeast) | SX2_G0007820.mRNA.1.CDS.1 |
4 | G | DNA polymerase delta subunit 3 | polymer | 350 | 40377.7 | 1 | UniProt (P47110) In PDB | Saccharomyces cerevisiae (baker's yeast) | |
5 | P, T | DNA (30-MER) | polymer | 30 | 9233.0 | 2 | synthetic construct | ||
6 | A | IRON/SULFUR CLUSTER | non-polymer | 351.6 | 1 | Chemie (SF4) | |||
7 | A | CALCIUM ION | non-polymer | 40.1 | 1 | Chemie (CA) | |||
8 | A | 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE | non-polymer | 467.2 | 1 | Chemie (DCP) | |||
9 | water | water | 18.0 | 31 | Chemie (HOH) |
Sequence modifications
A: 1 - 1504 (UniProt: P14284)
F: 1 - 487 (UniProt: A0A6A5PTG9)
PDB | External Database | Details |
---|---|---|
Met -33 | - | initiating methionine |
Asp -32 | - | expression tag |
Tyr -31 | - | expression tag |
Lys -30 | - | expression tag |
Asp -29 | - | expression tag |
Asp -28 | - | expression tag |
Asp -27 | - | expression tag |
Asp -26 | - | expression tag |
Lys -25 | - | expression tag |
Gly -24 | - | expression tag |
Asp -23 | - | expression tag |
His -22 | - | expression tag |
Asn -21 | - | expression tag |
His -20 | - | expression tag |
Arg -19 | - | expression tag |
His -18 | - | expression tag |
Lys -17 | - | expression tag |
His -16 | - | expression tag |
Gly -15 | - | expression tag |
Asp -14 | - | expression tag |
Pro -13 | - | expression tag |
Leu -12 | - | expression tag |
Glu -11 | - | expression tag |
Val -10 | - | expression tag |
Leu -9 | - | expression tag |
Phe -8 | - | expression tag |
Gln -7 | - | expression tag |
Gly -6 | - | expression tag |
Pro -5 | - | expression tag |
Gly -4 | - | expression tag |
Gly -3 | - | expression tag |
Asp -2 | - | expression tag |
Pro -1 | - | expression tag |
His 0 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly -6 | - | expression tag |
Pro -5 | - | expression tag |
Gly -4 | - | expression tag |
Gly -3 | - | expression tag |
Asp -2 | - | expression tag |
Leu -1 | - | expression tag |
His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 7 |
Total formula weight | 349482.8 | |
Non-Polymers* | Number of molecules | 3 |
Total formula weight | 858.9 | |
All* | Total formula weight | 350341.7 |