7RSV
Structure of the VPS34 kinase domain with compound 5
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B (A, B) | Phosphatidylinositol 3-kinase catalytic subunit type 3 | polymer | 612 | 70075.9 | 2 | UniProt (Q8NEB9) Pfam (PF00613) Pfam (PF00454) | Homo sapiens (Human) | PI3-kinase type 3,PI3K type 3,PtdIns-3-kinase type 3,Phosphatidylinositol 3-kinase p100 subunit,Phosphoinositide-3-kinase class 3,hVps34 |
2 | C, J (A, B) | (5aS,8aR,9S)-2-[(3R)-3-methylmorpholin-4-yl]-5,5a,6,7,8,8a-hexahydro-4H-cyclopenta[e]pyrazolo[1,5-a]pyrazin-4-one | non-polymer | 276.3 | 2 | Chemie (7IQ) | |||
3 | D, E, K (A, B) | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
4 | F, G, H, I, L (A, B) | SODIUM ION | non-polymer | 23.0 | 5 | Chemie (NA) | |||
5 | M, N (A, B) | water | water | 18.0 | 836 | Chemie (HOH) |
Sequence modifications
A, B: 282 - 879 (UniProt: Q8NEB9)
PDB | External Database | Details |
---|---|---|
His 268 | - | expression tag |
His 269 | - | expression tag |
His 270 | - | expression tag |
His 271 | - | expression tag |
His 272 | - | expression tag |
His 273 | - | expression tag |
Gly 274 | - | expression tag |
Glu 275 | - | expression tag |
Asn 276 | - | expression tag |
Leu 277 | - | expression tag |
Tyr 278 | - | expression tag |
Phe 279 | - | expression tag |
Gln 280 | - | expression tag |
Gly 281 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 140151.9 | |
Non-Polymers* | Number of molecules | 10 |
Total formula weight | 943.9 | |
All* | Total formula weight | 141095.8 |