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7RSM

Crystal structure of pyrrolysyl-tRNA synthetase (N346D/C348S/Y384F) in complex with o-Chlorophenylalanine and AMP-PNP

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
Pyrrolysine--tRNA ligasepolymer26730853.44UniProt (A0A0F8JXW8)
Pfam (PF01409)
UniProt (by SIFTS) (Q8PWY1)
Methanosarcina mazei (Methanosarcina frisia)Pyrrolysyl-tRNA synthetase,PylRS
2E, G, I, K
(A, B, C, D)
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTERnon-polymer506.24Chemie (ANP)
3F, H, J, L
(A, B, C, D)
2-chloro-L-phenylalaninenon-polymer199.64Chemie (2L5)
4M, N, O, P
(A, B, C, D)
waterwater18.0333Chemie (HOH)
Sequence modifications
A, B, C, D: 188 - 454 (UniProt: A0A0F8JXW8)
PDBExternal DatabaseDetails
Asp 346Asn 346engineered mutation
Ser 348Cys 348engineered mutation
Phe 384Tyr 384engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight123413.4
Non-Polymers*Number of molecules8
Total formula weight2823.3
All*Total formula weight126236.8
*Water molecules are not included.

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PDB entries from 2025-12-24

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