7RAM
Cryo-EM Structure of the HCMV gHgLgO Trimer Derived from AD169 and TR strains in complex with PDGFRalpha
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Envelope glycoprotein H | polymer | 706 | 80435.4 | 1 | UniProt (P12824) Pfam (PF02489) Pfam (PF17488) In PDB | Human herpesvirus 5 strain AD169 | gH |
2 | B | Envelope glycoprotein L | polymer | 242 | 27138.0 | 1 | UniProt (P16832) Pfam (PF01801) In PDB | Human herpesvirus 5 strain AD169 | gL |
3 | C | Envelope glycoprotein O | polymer | 463 | 53937.7 | 1 | UniProt (Q8AZ32) Pfam (PF07982) In PDB | Human betaherpesvirus 5 | Glycoprotein O,UL74,UL74 protein |
4 | D | Platelet-derived growth factor receptor alpha | polymer | 530 | 59370.0 | 1 | UniProt (P16234) Pfam (PF07679) In PDB | Homo sapiens (human) | PDGF-R-alpha,PDGFR-alpha,Alpha platelet-derived growth factor receptor,Alpha-type platelet-derived growth factor receptor,CD140 antigen-like family member A,CD140a antigen,Platelet-derived growth factor alpha receptor,Platelet-derived growth factor receptor 2,PDGFR-2 |
Sequence modifications
A: 41 - 718 (UniProt: P12824)
D: 1 - 524 (UniProt: P16234)
PDB | External Database | Details |
---|---|---|
Gly 719 | - | expression tag |
Ser 720 | - | expression tag |
Leu 721 | - | expression tag |
Val 722 | - | expression tag |
Pro 723 | - | expression tag |
Arg 724 | - | expression tag |
Gly 725 | - | expression tag |
Ser 726 | - | expression tag |
Ser 727 | - | expression tag |
Ala 728 | - | expression tag |
Trp 729 | - | expression tag |
Ser 730 | - | expression tag |
His 731 | - | expression tag |
Pro 732 | - | expression tag |
Gln 733 | - | expression tag |
Phe 734 | - | expression tag |
Glu 735 | - | expression tag |
Lys 736 | - | expression tag |
Ala 737 | - | expression tag |
Gly 738 | - | expression tag |
His 739 | - | expression tag |
His 740 | - | expression tag |
His 741 | - | expression tag |
His 742 | - | expression tag |
His 743 | - | expression tag |
His 744 | - | expression tag |
His 745 | - | expression tag |
His 746 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Pro 478 | Ser 478 | variant |
Glu 525 | - | expression tag |
Asn 526 | - | expression tag |
Leu 527 | - | expression tag |
Tyr 528 | - | expression tag |
Phe 529 | - | expression tag |
Gln 530 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 220881.2 | |
All* | Total formula weight | 220881.2 |