7RAG
Structure of the CwlD amidase from Clostridioides difficile in complex with the GerS lipoprotein
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Lipoprotein | polymer | 175 | 20823.2 | 1 | UniProt (A0A031WJD5) UniProt (by SIFTS) (Q180W3) | Clostridioides difficile (Peptoclostridium difficile) | Lipoprotein localisation LolA/LolB/LppX,Outer membrane lipoprotein-sorting protein,Putative lipoprotein |
| 2 | B (B) | Germination-specific N-acetylmuramoyl-L-alanine amidase, Autolysin | polymer | 217 | 24951.9 | 1 | UniProt (Q18CJ4) Pfam (PF01520) | Clostridioides difficile (Peptoclostridium difficile) | |
| 3 | C (B) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 4 | D (B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
| 5 | E, F (A, B) | water | water | 18.0 | 14 | Chemie (HOH) |
Sequence modifications
A: 23 - 196 (UniProt: A0A031WJD5)
B: 26 - 234 (UniProt: Q18CJ4)
| PDB | External Database | Details |
|---|---|---|
| Mse 22 | - | initiating methionine |
| PDB | External Database | Details |
|---|---|---|
| Mse 25 | - | initiating methionine |
| Val 235 | - | expression tag |
| Asp 236 | - | expression tag |
| Lys 237 | - | expression tag |
| Leu 238 | - | expression tag |
| Ala 239 | - | expression tag |
| Ala 240 | - | expression tag |
| Ala 241 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 45775.1 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 127.5 | |
| All* | Total formula weight | 45902.5 |
