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7QRM

Cryo-EM structure of catalytically active Spinacia oleracea cytochrome b6f in complex with endogenous plastoquinones at 2.7 A resolution

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, ICytochrome b6polymer21524186.52UniProt (P00165)
Pfam (PF00033)
In PDB
Spinacia oleracea (spinach)
2B, JCytochrome b6-f complex subunit 4polymer16017456.72UniProt (P00166)
Pfam (PF00032)
In PDB
Spinacia oleracea (spinach)17 kDa polypeptide
3C, KCytochrome fpolymer32035355.72UniProt (P16013)
Pfam (PF16639)
Pfam (PF01333)
In PDB
Spinacia oleracea (spinach)
4D, LCytochrome b6-f complex iron-sulfur subunit, chloroplasticpolymer23024347.92UniProt (P08980)
Pfam (PF00355)
In PDB
Spinacia oleracea (spinach)Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein,Rieske iron-sulfur protein,ISP,RISP
5E, MCytochrome b6-f complex subunit 6polymer313452.22UniProt (Q9M3L0)
Pfam (PF05115)
In PDB
Spinacia oleracea (spinach)Cytochrome b6-f complex subunit PetL,Cytochrome b6-f complex subunit VI
6F, NCytochrome b6-f complex subunit 7polymer363774.42UniProt (P80883)
Pfam (PF08041)
In PDB
Spinacia oleracea (spinach)Cytochrome b6-f complex subunit PetM,Cytochrome b6-f complex subunit VII
7G, OCytochrome b6-f complex subunit 5polymer374172.02UniProt (P69461)
Pfam (PF02529)
In PDB
Spinacia oleracea (spinach)Cytochrome b6-f complex subunit PetG,Cytochrome b6-f complex subunit V
8H, PCytochrome b6-f complex subunit 8polymer293170.82UniProt (P61045)
Pfam (PF03742)
In PDB
Spinacia oleracea (spinach)Cytochrome b6-f complex subunit PetN,Cytochrome b6-f complex subunit VIII
9I, APROTOPORPHYRIN IX CONTAINING FEnon-polymer616.54Chemie (HEM)
10C, I, A, KHEME Cnon-polymer618.54Chemie (HEC)
11J, ACHLOROPHYLL Anon-polymer893.52Chemie (CLA)
12D, I, J, A, B2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONEnon-polymer749.27Chemie (PL9)
13B, P, H, I, J...UNDECYL-MALTOSIDEnon-polymer496.610Chemie (UMQ)
14D, I, A, L(1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATEnon-polymer751.04Chemie (PGT)
15D, K1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROLnon-polymer795.12Chemie (SQD)
16D, LFE2/S2 (INORGANIC) CLUSTERnon-polymer175.82Chemie (FES)
17F, PBETA-CAROTENEnon-polymer536.92Chemie (BCR)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains16
Total formula weight231832.3
Non-Polymers*Number of molecules37
Total formula weight22956.9
All*Total formula weight254789.3
*Water molecules are not included.

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PDB entries from 2024-07-24

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