Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

7QQ3

Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(I)
23S ribosomal RNApolymer2904941752.61GenBank (939732440)Escherichia coli K-12
2B
(J)
5S ribosomal RNApolymer12038815.11GenBank (1526269268)Escherichia coli K-12
3C
(K)
50S ribosomal protein L2polymer27329923.61UniProt (P60422)
Pfam (PF00181)
Pfam (PF03947)
Escherichia coli K-12Large ribosomal subunit protein uL2
4D
(L)
50S ribosomal protein L3polymer20922277.51UniProt (P60438)
Pfam (PF00297)
Escherichia coli K-12Large ribosomal subunit protein uL3
5E
(M)
50S ribosomal protein L4polymer20122121.61UniProt (P60723)
Pfam (PF00573)
Escherichia coli K-12Large ribosomal subunit protein uL4
6F
(O)
50S ribosomal protein L6polymer17718932.81UniProt (P0AG55)
Pfam (PF00347)
Escherichia coli K-12Large ribosomal subunit protein uL6
7G
(R)
50S ribosomal protein L13polymer14216050.61UniProt (P0AA10)
Pfam (PF00572)
Escherichia coli K-12Large ribosomal subunit protein uL13
8H
(S)
50S ribosomal protein L14polymer12313565.11UniProt (P0ADY3)
Pfam (PF00238)
Escherichia coli K-12Large ribosomal subunit protein uL14
9I
(T)
50S ribosomal protein L15polymer14314879.41UniProt (P02413)
Pfam (PF00828)
Escherichia coli K-12Large ribosomal subunit protein uL15
10J
(U)
50S ribosomal protein L16polymer13615312.31UniProt (P0ADY7)
Pfam (PF00252)
Escherichia coli K-12Large ribosomal subunit protein uL16
11K
(V)
50S ribosomal protein L17polymer12714393.71UniProt (P0AG44)
Pfam (PF01196)
Escherichia coli K-12Large ribosomal subunit protein bL17
12L
(W)
50S ribosomal protein L18polymer11712794.71UniProt (P0C018)
Pfam (PF00861)
Escherichia coli K-12Large ribosomal subunit protein uL18
13M
(X)
50S ribosomal protein L19polymer11513159.31UniProt (P0A7K6)
Pfam (PF01245)
Escherichia coli K-12Large ribosomal subunit protein bL19
14N
(Y)
50S ribosomal protein L20polymer11813528.01UniProt (P0A7L3)
Pfam (PF00453)
Escherichia coli K-12Large ribosomal subunit protein bL20
15O
(Z)
50S ribosomal protein L21polymer10311586.41UniProt (P0AG48)
Pfam (PF00829)
Escherichia coli K-12Large ribosomal subunit protein bL21
16P
(a)
50S ribosomal protein L22polymer11012253.41UniProt (P61175)
Pfam (PF00237)
Escherichia coli K-12Large ribosomal subunit protein uL22
17Q
(b)
50S ribosomal protein L23polymer10011222.21UniProt (P0ADZ0)
Pfam (PF00276)
Escherichia coli K-12Large ribosomal subunit protein uL23
18R
(c)
50S ribosomal protein L24polymer10411339.31UniProt (P60624)
Pfam (PF00467)
Pfam (PF17136)
Escherichia coli K-12Large ribosomal subunit protein uL24
19S
(d)
50S ribosomal protein L25polymer9410713.51UniProt (P68919)
Pfam (PF01386)
Escherichia coli K-12Large ribosomal subunit protein bL25
20T
(e)
50S ribosomal protein L27polymer859146.51UniProt (P0A7L8)
Pfam (PF01016)
Escherichia coli K-12Large ribosomal subunit protein bL27
21U
(f)
50S ribosomal protein L28polymer789027.61UniProt (P0A7M2)
Pfam (PF00830)
Escherichia coli K-12Large ribosomal subunit protein bL28
22V
(g)
50S ribosomal protein L29polymer637286.51UniProt (P0A7M6)
Pfam (PF00831)
Escherichia coli K-12Large ribosomal subunit protein uL29
23W
(h)
50S ribosomal protein L30polymer596554.81UniProt (P0AG51)
Pfam (PF00327)
Escherichia coli K-12Large ribosomal subunit protein uL30
24X
(i)
50S ribosomal protein L32polymer576463.41UniProt (P0A7N4)
Pfam (PF01783)
Escherichia coli K-12Large ribosomal subunit protein bL32
25Y
(j)
50S ribosomal protein L33polymer556388.61UniProt (P0A7N9)
Pfam (PF00471)
Escherichia coli K-12Large ribosomal subunit protein bL33
26Z
(k)
50S ribosomal protein L34polymer465397.51UniProt (P0A7P5)
Pfam (PF00468)
Escherichia coli K-12Large ribosomal subunit protein bL34
27AA
(l)
50S ribosomal protein L35polymer657313.01UniProt (P0A7Q1)
Pfam (PF01632)
Escherichia coli K-12Large ribosomal subunit protein bL35,Ribosomal protein A
28BA
(m)
50S ribosomal protein L36polymer384377.41UniProt (P0A7Q6)
Pfam (PF00444)
Escherichia coli K-12Large ribosomal subunit protein bL36-A,Ribosomal protein B
29CA
(B)
Myxovalargin Apolymer161678.11BIRD (PRD_002442)Myxococcus fulvus
30AB, AC, AD, AE, AF...
(I, J, L)
MAGNESIUM IONnon-polymer24.3145Chemie (MG)
31SF
(m)
ZINC IONnon-polymer65.41Chemie (ZN)
32TF, UF
(I, B)
waterwater18.028Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains29
Total formula weight1308254.1
Non-Polymers*Number of molecules146
Total formula weight3589.6
All*Total formula weight1311843.8
*Water molecules are not included.

239149

PDB entries from 2025-07-23

PDB statisticsPDBj update infoContact PDBjnumon