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7QCA

Spraguea lophii ribosome

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(L50)
RNA 23Spolymer2618849039.81Spraguea lophii 42_110
2B
(L70)
RNA 5Spolymer11938356.81Spraguea lophii 42_110
3C
(LA0)
60S ribosomal protein L8polymer24627005.51Spraguea lophii 42_110
4D
(LAA)
uL15 LAApolymer14716609.51Spraguea lophii 42_110
5E
(LB0)
60S ribosomal protein L3polymer39244320.61UniProt (S7XFB1)
Pfam (PF00297)
Spraguea lophii 42_110
6F
(LC0)
60S ribosomal protein L4polymer32837241.61UniProt (S7WCM8)
Pfam (PF00573)
Spraguea lophii 42_110
7G
(LCC)
60S ribosomal protein L3polymer11012484.41UniProt (S7WAY0)
Pfam (PF01248)
Spraguea lophii 42_110
8H
(LD0)
60S ribosomal protein L5polymer29133892.31UniProt (S7XIG7)
Pfam (PF17144)
Pfam (PF14204)
Spraguea lophii 42_110
9I
(LDD)
60S ribosomal protein L31polymer11012854.21UniProt (S7XW48)
Pfam (PF01198)
Spraguea lophii 42_110
10J
(LE0)
60S ribosomal protein L6polymer17120220.11UniProt (S7W5S3)Spraguea lophii 42_110
11K
(LEE)
60S ribosomal protein L32polymer13916076.01UniProt (S7XKE0)
Pfam (PF01655)
Spraguea lophii 42_110
12L
(LF0)
60S ribosomal protein L7polymer23527935.61UniProt (S7W946)
Pfam (PF00327)
Spraguea lophii 42_110
13M
(LFF)
60S ribosomal protein L35apolymer11112758.01UniProt (S7W662)
Pfam (PF01247)
Spraguea lophii 42_110
14N
(LG0)
60S ribosomal protein L8polymer20623605.01UniProt (S7XU63)
Pfam (PF01248)
Spraguea lophii 42_110
15O
(LGG)
Ribosomal protein L34polymer10612020.31UniProt (S7W7C6)
Pfam (PF01199)
Spraguea lophii 42_110
16P
(LH0)
60S ribosomal protein L9polymer18721538.21UniProt (S7XRZ9)
Pfam (PF00347)
Spraguea lophii 42_110
17Q
(LHH)
Ribosomal L29 proteinpolymer11914183.91Spraguea lophii 42_110
18R
(LI0)
S60 ribosomal protein L10polymer21825142.31UniProt (S7WBF8)
Pfam (PF00252)
Spraguea lophii 42_110
19S
(LII)
60S ribosomal protein L36polymer9811350.71UniProt (S7WED1)
Pfam (PF01158)
Spraguea lophii 42_110
20T
(LJ0)
60S ribosomal protein L11polymer17119485.01UniProt (S7WB69)
Pfam (PF00281)
Pfam (PF00673)
Spraguea lophii 42_110
21U
(LJJ)
eL37 LJJpolymer9210517.71Spraguea lophii 42_110
22V
(LL0)
60S ribosomal protein L13polymer16519513.11UniProt (S7XVM9)
Pfam (PF01294)
Spraguea lophii 42_110
23W
(LLL)
60S ribosomal protein L39polymer526227.61UniProt (S7XTP1)
Pfam (PF00832)
Spraguea lophii 42_110
24X
(LM0)
eL14 LM0polymer12214158.41UniProt (S7XVN9)Spraguea lophii 42_110
25Y
(LMM)
Ubiquitinpolymer12714563.91UniProt (S7XSQ3)
Pfam (PF00240)
Pfam (PF01020)
Spraguea lophii 42_110
26Z
(LN0)
Ribosomal protein L15polymer20424200.41UniProt (S7W7A2)
Pfam (PF00827)
Spraguea lophii 42_110
27AA
(LO0)
Ribosomal protein L13Apolymer19822885.11UniProt (S7XUD8)
Pfam (PF00572)
Spraguea lophii 42_110
28BA
(LOO)
60S ribosomal protein L44polymer10411990.51UniProt (S7XL20)
Pfam (PF00935)
Spraguea lophii 42_110
29CA
(LP0)
60S ribosomal protein L17polymer16719114.51UniProt (S7WDR4)
Pfam (PF00237)
Spraguea lophii 42_110
30DA
(LPP)
60S ribosomal protein L37apolymer8910151.11Spraguea lophii 42_110 (Microsporidian parasite)
31EA
(LQ0)
60S ribosomal protein L18polymer18321378.11UniProt (S7WAI2)
Pfam (PF17135)
Spraguea lophii 42_110
32FA
(LR0)
60S ribosomal protein L19polymer16819550.01UniProt (S7WBY9)
Pfam (PF01280)
Spraguea lophii 42_110
33GA
(LS0)
60S ribosomal protein L20polymer17120043.41UniProt (S7WAG4)
Pfam (PF01775)
Spraguea lophii 42_110
34HA
(LT0)
60s ribosomal protein L21polymer15818344.41UniProt (S7W8F6)
Pfam (PF01157)
Spraguea lophii 42_110
35IA
(LU0)
60S ribosomal protein L22polymer11312854.81UniProt (S7W958)
Pfam (PF01776)
Spraguea lophii 42_110
36JA
(LV0)
Ribosomal protein L23polymer14215240.01UniProt (S7XLC4)
Pfam (PF00238)
Spraguea lophii 42_110
37KA
(LW0)
Ribosomal protein L24Epolymer13115342.21UniProt (S7XSY2)
Pfam (PF01246)
Spraguea lophii 42_110
38LA
(LX0)
60S ribosomal protein L23apolymer11312557.91UniProt (S7XFW8)
Pfam (PF00276)
Spraguea lophii 42_110
39MA
(LY0)
60S ribosomal protein L26polymer13115026.91UniProt (S7W884)
Pfam (PF16906)
Pfam (PF00467)
Spraguea lophii 42_110
40NA
(LZ0)
60S ribosomal protein L27polymer15318247.81UniProt (S7XU08)
Pfam (PF01777)
Spraguea lophii 42_110
41OA
(S60)
RNA SSUpolymer1368444812.51Spraguea lophii 42_110
42PA
(SA0)
40S ribosomal protein S0polymer23326201.21UniProt (S7W8R1)
Pfam (PF00318)
Spraguea lophii 42_110
43QA
(SAA)
40S ribosomal protein S26polymer10211974.11UniProt (S7W9M7)
Pfam (PF01283)
Spraguea lophii 42_110
44RA
(SB0)
eS1 SB0polymer23025934.71Spraguea lophii 42_110
45SA
(SBB)
eS27 SBBpolymer829189.91Spraguea lophii 42_110
46TA
(SC0)
40S ribosomal protein S2polymer24827241.51UniProt (S7W7R5)
Pfam (PF00333)
Pfam (PF03719)
Spraguea lophii 42_110
47UA
(SCC)
eS28 SCCpolymer657288.51Spraguea lophii 42_110
48VA
(SD0)
40S ribosomal protein S3polymer24227516.51UniProt (S7WAW0)
Pfam (PF00189)
Spraguea lophii 42_110
49WA
(SDD)
40S ribosomal protein S29polymer657891.21UniProt (S7XJB1)
Pfam (PF00253)
Spraguea lophii 42_110
50XA
(SE0)
40S ribosomal protein S4polymer28031442.21UniProt (S7XG51)
Pfam (PF08071)
Pfam (PF00900)
Pfam (PF16121)
Spraguea lophii 42_110
51YA
(SEE)
eS30 SEEpolymer606816.01Spraguea lophii 42_110
52ZA
(SF0)
40S ribosomal protein S5polymer19521982.81UniProt (S7W4M9)
Pfam (PF00177)
Spraguea lophii 42_110
53AB
(SFF)
Ubiquitin/40s ribosomal protein S27a fusionpolymer15016937.81UniProt (S7W9X5)
Pfam (PF00240)
Pfam (PF01599)
Spraguea lophii 42_110
54BB
(SG0)
40S ribosomal protein S6polymer23026238.91Spraguea lophii 42_110 (Microsporidian parasite)
55CB
(SGG)
Guanine nucleotide binding protein beta subunitpolymer32636182.81UniProt (S7XVG3)
Pfam (PF00400)
Spraguea lophii 42_110
56DB
(SH0)
40S ribosomal protein S7polymer16419132.01UniProt (S7XV29)
Pfam (PF01251)
Spraguea lophii 42_110
57EB
(SI0)
40S ribosomal protein S8polymer17319912.11UniProt (S7XGW2)
Pfam (PF01201)
Spraguea lophii 42_110
58FB
(SJ0)
40S ribosomal protein S9polymer18421366.01UniProt (S7W8E3)
Pfam (PF01479)
Spraguea lophii 42_110
59GB
(SK0)
40S ribosomal protein S10polymer10712702.51UniProt (S7XU48)
Pfam (PF03501)
Spraguea lophii 42_110
60HB
(SL0)
40S ribosomal protein S11polymer15518109.41UniProt (S7W8R0)
Pfam (PF16205)
Pfam (PF00366)
Spraguea lophii 42_110
61IB
(SM0)
40S ribosomal protein S12polymer13014343.71UniProt (S7W7D2)
Pfam (PF01248)
Spraguea lophii 42_110
62JB
(SN0)
40S ribosomal protein S13polymer14316192.01UniProt (S7XVZ9)
Pfam (PF08069)
Spraguea lophii 42_110
63KB
(SO0)
40S ribosomal protein S14polymer13514708.01UniProt (S7W6I0)
Pfam (PF00411)
Spraguea lophii 42_110
64LB
(SP0)
Ribosomal protein S19polymer16318514.61UniProt (S7XKY9)
Pfam (PF00203)
Spraguea lophii 42_110
65MB
(SQ0)
40S ribosomal protein S16polymer14316415.11UniProt (S7WDU9)
Pfam (PF00380)
Spraguea lophii 42_110
66NB
(SR0)
eS17 SR0polymer12014055.31Spraguea lophii 42_110
67OB
(SS0)
40S ribosomal protein S18polymer16018171.11UniProt (S7XJA1)
Pfam (PF00416)
Spraguea lophii 42_110
68PB
(ST0)
40S Ribosomal protein S19polymer14316603.31UniProt (S7W7P5)
Pfam (PF01090)
Spraguea lophii 42_110
69QB
(SU0)
40S ribosomal protein S20polymer11913777.11UniProt (S7W986)
Pfam (PF00338)
Spraguea lophii 42_110
70RB
(SV0)
Ribosomal protein S21Epolymer677768.91UniProt (S7WAC1)
Pfam (PF01249)
Spraguea lophii 42_110
71SB
(SW0)
40S ribosomal protein S15Apolymer12814620.11UniProt (S7XK92)
Pfam (PF00410)
Spraguea lophii 42_110
72TB
(SX0)
uS12 SX0polymer14115822.71Spraguea lophii 42_110
73UB
(SY0)
40s ribosomal protein s24polymer14617189.91UniProt (S7W8J5)
Pfam (PF01282)
Spraguea lophii 42_110
74VB
(SZ0)
40S ribosomal protein S25polymer12814777.11UniProt (S7WAV8)
Pfam (PF03297)
Spraguea lophii 42_110
75AC, AD, AE, AF, AG...
(L50, LN0, S60, LA0, LEE...)
POTASSIUM IONnon-polymer39.1199Chemie (K)
76AI, AJ, AK, AL, AO...
(L50, S60, LV0, L70, LB0...)
MAGNESIUM IONnon-polymer24.3160Chemie (MG)
77BM, CM, QP, RP, SP...
(LOO, LPP, SAA, SBB, SDD...)
ZINC IONnon-polymer65.49Chemie (ZN)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains74
Total formula weight2629859.0
Non-Polymers*Number of molecules368
Total formula weight12258.0
All*Total formula weight2642117.0
*Water molecules are not included.

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PDB entries from 2025-06-11

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