7QBT
B12-dependent radical SAM methyltransferase, Mmp10 with [4Fe-4S] cluster, cobalamin, and S-methyl-5'-thioadenosine bound.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D (A, B, C, D) | Methyl coenzyme M reductase-arginine methyltransferase Mmp10 | polymer | 436 | 47964.9 | 4 | UniProt (A0A832SFM5) Pfam (PF19238) UniProt (by SIFTS) (Q8THG6) | Methanosarcina acetivorans | |
2 | E, J, O, T (A, B, C, D) | IRON/SULFUR CLUSTER | non-polymer | 351.6 | 4 | Chemie (SF4) | |||
3 | F, K, P, U (A, B, C, D) | FE (III) ION | non-polymer | 55.8 | 4 | Chemie (FE) | |||
4 | G, L, Q, V (A, B, C, D) | 5'-DEOXY-5'-METHYLTHIOADENOSINE | non-polymer | 297.3 | 4 | Chemie (MTA) | |||
5 | H, M, R, W (A, B, C, D) | CO-METHYLCOBALAMIN | non-polymer | 1344.4 | 4 | Chemie (COB) | |||
6 | I, N, S, X (A, B, C, D) | SODIUM ION | non-polymer | 23.0 | 4 | Chemie (NA) | |||
7 | AA, BA, Y, Z (C, D, A, B) | water | water | 18.0 | 1268 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 411 (UniProt: A0A832SFM5)
PDB | External Database | Details |
---|---|---|
Met -24 | - | initiating methionine |
Ala -23 | - | expression tag |
Ser -22 | - | expression tag |
Trp -21 | - | expression tag |
Ser -20 | - | expression tag |
His -19 | - | expression tag |
Pro -18 | - | expression tag |
Gln -17 | - | expression tag |
Phe -16 | - | expression tag |
Glu -15 | - | expression tag |
Lys -14 | - | expression tag |
Ser -13 | - | expression tag |
Gly -12 | - | expression tag |
Gly -11 | - | expression tag |
Gly -10 | - | expression tag |
Gly -9 | - | expression tag |
Gly -8 | - | expression tag |
Glu -7 | - | expression tag |
Asn -6 | - | expression tag |
Leu -5 | - | expression tag |
Tyr -4 | - | expression tag |
Phe -3 | - | expression tag |
Gln -2 | - | expression tag |
Gly -1 | - | expression tag |
His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 191859.4 | |
Non-Polymers* | Number of molecules | 20 |
Total formula weight | 8288.8 | |
All* | Total formula weight | 200148.2 |