7Q9X
Crystal structure of Chromobacterium violaceum aminotransferase in complex with PLP-pyruvate adduct
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (AAA, BBB, CCC, DDD) | Probable aminotransferase | polymer | 493 | 54832.2 | 4 | UniProt (Q7NWG4) Pfam (PF00202) | Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) | |
| 2 | E, SB, U, YA (AAA, DDD, BBB, CCC) | (3E)-4-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}-2-oxobut-3-enoic acid | non-polymer | 317.2 | 4 | Chemie (AN7) | |||
| 3 | AB, F, G, TB, V (CCC, AAA, DDD, BBB) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 5 | Chemie (EDO) | |||
| 4 | AA, AC, BA, BB, BC... (BBB, DDD, CCC, AAA) | SODIUM ION | non-polymer | 23.0 | 77 | Chemie (NA) | |||
| 5 | W (BBB) | PYRIDOXAL-5'-PHOSPHATE | non-polymer | 247.1 | 1 | Chemie (PLP) | |||
| 6 | UB, X (DDD, BBB) | PHOSPHATE ION | non-polymer | 95.0 | 2 | Chemie (PO4) | |||
| 7 | ZA (CCC) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
| 8 | QC, RC, SC, TC (AAA, BBB, CCC, DDD) | water | water | 18.0 | 2031 | Chemie (HOH) |
Sequence modifications
AAA, BBB, CCC, DDD: 1 - 459 (UniProt: Q7NWG4)
| PDB | External Database | Details |
|---|---|---|
| Met -33 | - | initiating methionine |
| Gly -32 | - | expression tag |
| Ser -31 | - | expression tag |
| Ser -30 | - | expression tag |
| His -29 | - | expression tag |
| His -28 | - | expression tag |
| His -27 | - | expression tag |
| His -26 | - | expression tag |
| His -25 | - | expression tag |
| His -24 | - | expression tag |
| Ser -23 | - | expression tag |
| Ser -22 | - | expression tag |
| Gly -21 | - | expression tag |
| Leu -20 | - | expression tag |
| Val -19 | - | expression tag |
| Pro -18 | - | expression tag |
| Arg -17 | - | expression tag |
| Gly -16 | - | expression tag |
| Ser -15 | - | expression tag |
| His -14 | - | expression tag |
| Met -13 | - | expression tag |
| Ala -12 | - | expression tag |
| Ser -11 | - | expression tag |
| Met -10 | - | expression tag |
| Thr -9 | - | expression tag |
| Gly -8 | - | expression tag |
| Gly -7 | - | expression tag |
| Gln -6 | - | expression tag |
| Gln -5 | - | expression tag |
| Met -4 | - | expression tag |
| Gly -3 | - | expression tag |
| Arg -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 219328.9 | |
| Non-Polymers* | Number of molecules | 90 |
| Total formula weight | 3892.5 | |
| All* | Total formula weight | 223221.5 |
