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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

7Q4K

Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AA16S rRNApolymer1534497405.01GenBank (1758835854)Escherichia coli
2AB30S ribosomal protein S2polymer24126781.71UniProt (C3TPN2)
Pfam (PF00318)
In PDB		Escherichia coli
3AC30S ribosomal protein S3polymer23326031.31UniProt (C3SQX2)
Pfam (PF07650)
Pfam (PF00189)
In PDB		Escherichia coli
4AD30S ribosomal protein S4polymer20623514.21UniProt (C3SR62)
Pfam (PF00163)
Pfam (PF01479)
In PDB		Escherichia coli
5AE30S ribosomal protein S5polymer16717629.41UniProt (C3SR27)
Pfam (PF00333)
Pfam (PF03719)
In PDB		Escherichia coli
6AF30S ribosomal protein S6polymer13515727.51UniProt (P02358)
Pfam (PF01250)
In PDB		Escherichia coliSmall ribosomal subunit protein bS6
7AG30S ribosomal protein S7polymer17920055.21UniProt (P02359)
Pfam (PF00177)
In PDB		Escherichia coli K-12Small ribosomal subunit protein uS7
8AH30S ribosomal protein S8polymer13014146.61UniProt (C3SR12)
Pfam (PF00410)
In PDB		Escherichia coli
9AI30S ribosomal protein S9polymer13014886.31UniProt (C3SRY2)
Pfam (PF00380)
In PDB		Escherichia coli
10AJ30S ribosomal protein S10polymer10311755.61UniProt (C3SQT7)
Pfam (PF00338)
In PDB		Escherichia coli
11AK30S ribosomal protein S11polymer12913871.01UniProt (C3SR57)
Pfam (PF00411)
In PDB		Escherichia coli
12AL30S ribosomal protein S12polymer12413814.21UniProt (C3SQR7)
Pfam (PF00164)
In PDB		Escherichia coli
13AM30S ribosomal protein S13polymer11813128.51UniProt (C3SR52)
Pfam (PF00416)
In PDB		Escherichia coli
14AN30S ribosomal protein S14polymer10211677.61UniProt (C3SR07)
Pfam (PF00253)
In PDB		Escherichia coli
15AO30S ribosomal protein S15polymer8910290.81UniProt (C3SSQ7)
Pfam (PF00312)
In PDB		Escherichia coli
16AP30S ribosomal protein S16polymer829207.61UniProt (C3SYP2)
Pfam (PF00886)
In PDB		Escherichia coli
17AQ30S ribosomal protein S17polymer849724.51UniProt (C3SQY7)
Pfam (PF00366)
In PDB		Escherichia coli
18AR30S ribosomal protein S18polymer759005.51UniProt (C3SFP7)
Pfam (PF01084)
In PDB		Escherichia coli
19AS30S ribosomal protein S19polymer9210455.41UniProt (C3SQW2)
Pfam (PF00203)
In PDB		Escherichia coli
20AT30S ribosomal protein S20polymer879708.51UniProt (C3TRH7)
Pfam (PF01649)
In PDB		Escherichia coli
21AU30S ribosomal protein S21polymer718524.01UniProt (C3STZ7)
Pfam (PF01165)
In PDB		Escherichia coli
22BA23S rRNApolymer2903941505.41GenBank (1109114233)Escherichia coli
23BB5S rRNApolymer12038790.11GenBank (CP035706.1)Escherichia coli
24BC50S ribosomal protein L2polymer27329923.61UniProt (P60422)
Pfam (PF00181)
Pfam (PF03947)
In PDB		Escherichia coliribosomal protein uL2
25BD50S ribosomal protein L3polymer20922291.61UniProt (P60438)
Pfam (PF00297)
In PDB		Escherichia coliLarge ribosomal subunit protein uL3
26BE50S ribosomal protein L4polymer20122121.61UniProt (P60723)
Pfam (PF00573)
In PDB		Escherichia coliribosomal protein uL4
27BF50S ribosomal protein L5polymer17920333.61UniProt (P62399)
Pfam (PF00281)
Pfam (PF00673)
In PDB		Escherichia coliribosomal protein uL5
28BG50S ribosomal protein L6polymer17718932.81UniProt (P0AG55)
Pfam (PF00347)
In PDB		Escherichia coliribosomal protein uL6
29BH50S ribosomal protein L9polymer14915789.01UniProt (P0A7R1)
Pfam (PF01281)
Pfam (PF03948)
In PDB		Escherichia coliribosomal protein bL9
30BI50S ribosomal protein L31polymer707887.11UniProt (U9XX47)
In PDB		Escherichia coli
31BJ50S ribosomal protein L13polymer14216050.61UniProt (P0AA10)
Pfam (PF00572)
In PDB		Escherichia coliribosomal protein uL13
32BK50S ribosomal protein L14polymer12313565.11UniProt (P0ADY3)
Pfam (PF00238)
In PDB		Escherichia coliribosomal protein uL14
33BL50S ribosomal protein L15polymer14415008.51UniProt (P02413)
Pfam (PF00828)
In PDB		Escherichia coliribosomal protein uL15
34BM50S ribosomal protein L16polymer13615327.31UniProt (P0ADY7)
Pfam (PF00252)
In PDB		Escherichia coliLarge ribosomal subunit protein uL16
35BN50S ribosomal protein L17polymer12714393.71UniProt (P0AG44)
Pfam (PF01196)
In PDB		Escherichia coliribosomal protein bL17
36BO50S ribosomal protein L18polymer11712794.71UniProt (P0C018)
Pfam (PF00861)
In PDB		Escherichia coliribosomal protein uL18
37BP50S ribosomal protein L19polymer11513159.31UniProt (P0A7K6)
Pfam (PF01245)
In PDB		Escherichia coliribosomal protein bL19
38BQ50S ribosomal protein L20polymer11813528.01UniProt (P0A7L3)
Pfam (PF00453)
In PDB		Escherichia coliribosomal protein bL20
39BR50S ribosomal protein L21polymer10311586.41UniProt (P0AG48)
Pfam (PF00829)
In PDB		Escherichia coliribosomal protein bL21
40BS50S ribosomal protein L22polymer11012253.41UniProt (P61175)
Pfam (PF00237)
In PDB		Escherichia coliribosomal protein uL22
41BT50S ribosomal protein L23polymer10011222.21UniProt (P0ADZ0)
Pfam (PF00276)
In PDB		Escherichia coliribosomal protein uL23
42BU50S ribosomal protein L24polymer10411339.31UniProt (P60624)
Pfam (PF00467)
Pfam (PF17136)
In PDB		Escherichia coliribosomal protein uL24
43BV50S ribosomal protein L25polymer9410713.51UniProt (P68919)
Pfam (PF01386)
In PDB		Escherichia coliribosomal protein bL25
44BW50S ribosomal protein L27polymer859146.51UniProt (P0A7L8)
Pfam (PF01016)
In PDB		Escherichia coliribosomal protein bL27
45BX50S ribosomal protein L28polymer789027.61UniProt (P0A7M2)
Pfam (PF00830)
In PDB		Escherichia coliribosomal protein bL28
46BY50S ribosomal protein L29polymer637286.51UniProt (P0A7M6)
Pfam (PF00831)
In PDB		Escherichia coliribosomal protein uL29
47BZ50S ribosomal protein L30polymer596554.81UniProt (P0AG51)
Pfam (PF00327)
In PDB		Escherichia coliribosomal protein uL30
48B050S ribosomal protein L32polymer576463.41UniProt (P0A7N4)
Pfam (PF01783)
In PDB		Escherichia coliribosomal protein bL32
49B150S ribosomal protein L33polymer556388.61UniProt (P0A7N9)
Pfam (PF00471)
In PDB		Escherichia coliribosomal protein bL33
50B250S ribosomal protein L34polymer465397.51UniProt (P0A7P5)
Pfam (PF00468)
In PDB		Escherichia coliribosomal protein bL34
51B350S ribosomal protein L35polymer657313.01UniProt (P0A7Q1)
Pfam (PF01632)
In PDB		Escherichia coliRibosomal protein A, ribosomal protein bL35
52B450S ribosomal protein L36polymer384377.41UniProt (P0A7Q6)
Pfam (PF00444)
In PDB		Escherichia coliRibosomal protein B, ribosomal protein bL36
53D1MsrDL: FME-TYR-LEU-ILE-PHE-METpolymer6845.11Streptococcus pneumoniae
54D2Met-tRNA (P site)polymer7725084.21Escherichia coli
55D3Phe-tRNA (E site)polymer7624620.81Escherichia coli
56D4MsrDL mRNApolymer92817.71Streptococcus pneumoniae
57AA, BA, BC, BD, D2MAGNESIUM IONnon-polymer24.3172Chemie (MG)
58BAERYTHROMYCIN Anon-polymer733.91Chemie (ERY)
59waterwater18.0800Chemie (HOH)
Sequence modifications
AN: 0 - 101 (UniProt: C3SR07)
PDBExternal DatabaseDetails
Ala 35-insertion
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains56
Total formula weight2191179.6
Non-Polymers*Number of molecules173
Total formula weight4914.4
All*Total formula weight2196094.0
*Water molecules are not included.

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PDB entries from 2024-07-17

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