7Q0P
Structure of the Candida albicans 80S ribosome in complex with anisomycin
This is a non-PDB format compatible entry.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | 1 | 25S ribosomal RNA | polymer | 3359 | 1085306.3 | 1 | Candida albicans SC5314 | ||
2 | 3 | 5S ribosomal RNA | polymer | 121 | 38943.1 | 1 | Candida albicans SC5314 | ||
3 | 4 | 5.8S ribosomal RNA | polymer | 158 | 50683.9 | 1 | Candida albicans SC5314 | ||
4 | 10 | Mixture of endogenous E-tRNA | polymer | 77 | 24730.7 | 1 | Candida albicans SC5314 | ||
5 | j | Ribosomal 60S subunit protein L2A | polymer | 254 | 27366.6 | 1 | UniProt (A0A1D8PF08) Pfam (PF00181) Pfam (PF03947) In PDB | Candida albicans SC5314 | |
6 | k | Ribosomal 60S subunit protein L3 | polymer | 389 | 44040.8 | 1 | UniProt (Q59LS1) Pfam (PF00297) In PDB | Candida albicans SC5314 | |
7 | l | Ribosomal 60S subunit protein L4B | polymer | 363 | 39282.4 | 1 | UniProt (A0A1D8PFV1) Pfam (PF00573) Pfam (PF14374) In PDB | Candida albicans SC5314 | |
8 | m | Ribosomal 60S subunit protein L5 | polymer | 298 | 34558.0 | 1 | UniProt (Q5AGZ7) Pfam (PF17144) Pfam (PF14204) In PDB | Candida albicans SC5314 | |
9 | n | 60S ribosomal protein L6 | polymer | 176 | 19798.0 | 1 | UniProt (A0A1D8PCX8) Pfam (PF01159) In PDB | Candida albicans SC5314 | |
10 | o | Ribosomal 60S subunit protein L7A | polymer | 241 | 27447.0 | 1 | UniProt (A0A1D8PDL6) Pfam (PF08079) Pfam (PF00327) In PDB | Candida albicans SC5314 | |
11 | p | 60S ribosomal protein L8 | polymer | 262 | 28549.4 | 1 | UniProt (Q5ANA1) Pfam (PF01248) In PDB | Candida albicans SC5314 | |
12 | q | Ribosomal 60S subunit protein L9B | polymer | 191 | 21755.2 | 1 | UniProt (Q5AEN2) Pfam (PF00347) In PDB | Candida albicans SC5314 | |
13 | r | Ribosomal 60S subunit protein L10 | polymer | 220 | 25236.3 | 1 | UniProt (Q5AIB8) Pfam (PF00252) In PDB | Candida albicans SC5314 | |
14 | s | Ribosomal 60S subunit protein L11B | polymer | 174 | 19859.8 | 1 | UniProt (A0A1D8PHW1) Pfam (PF00281) Pfam (PF00673) In PDB | Candida albicans SC5314 | |
15 | t | 60S ribosomal protein L13 | polymer | 202 | 23105.8 | 1 | UniProt (O59931) Pfam (PF01294) In PDB | Candida albicans SC5314 | |
16 | u | Ribosomal 60S subunit protein L14B | polymer | 131 | 14748.5 | 1 | UniProt (A0A1D8PFL9) Pfam (PF01929) In PDB | Candida albicans SC5314 | |
17 | v | Ribosomal protein L15 | polymer | 204 | 24389.3 | 1 | UniProt (Q5A6R1) Pfam (PF00827) In PDB | Candida albicans SC5314 | |
18 | w | Ribosomal 60S subunit protein L16A | polymer | 200 | 22685.8 | 1 | UniProt (Q5AB87) Pfam (PF00572) In PDB | Candida albicans SC5314 | |
19 | x | Ribosomal 60S subunit protein L17B | polymer | 185 | 21002.9 | 1 | UniProt (Q59TE0) Pfam (PF00237) In PDB | Candida albicans SC5314 | |
20 | y | Ribosomal 60S subunit protein L18A | polymer | 186 | 20817.4 | 1 | UniProt (A0A1D8PK43) Pfam (PF17135) In PDB | Candida albicans SC5314 | |
21 | z | Ribosomal protein L19 | polymer | 190 | 21942.8 | 1 | UniProt (A0A1D8PK40) Pfam (PF01280) In PDB | Candida albicans SC5314 | |
22 | 0 | 60S ribosomal protein L20 | polymer | 172 | 20376.9 | 1 | UniProt (A0A1D8PLC9) Pfam (PF01775) In PDB | Candida albicans SC5314 | |
23 | 2 | Ribosomal 60S subunit protein L21A | polymer | 160 | 18049.9 | 1 | UniProt (A0A1D8PGY0) Pfam (PF01157) In PDB | Candida albicans SC5314 | |
24 | 5 | Ribosomal 60S subunit protein L22B | polymer | 124 | 14107.9 | 1 | UniProt (A0A1D8PM41) Pfam (PF01776) In PDB | Candida albicans SC5314 | |
25 | 6 | Ribosomal 60S subunit protein L23B | polymer | 137 | 14508.0 | 1 | UniProt (A0A1D8PPT5) Pfam (PF00238) In PDB | Candida albicans SC5314 | |
26 | 7 | Ribosomal 60S subunit protein L24A | polymer | 155 | 17430.3 | 1 | UniProt (Q5A6A1) Pfam (PF01246) In PDB | Candida albicans SC5314 | |
27 | 8 | Ribosomal 60S subunit protein L25 | polymer | 142 | 15873.6 | 1 | UniProt (A0A1D8PPS1) Pfam (PF03939) Pfam (PF00276) In PDB | Candida albicans SC5314 | |
28 | 9 | Ribosomal 60S subunit protein L26B | polymer | 127 | 14215.5 | 1 | UniProt (A0A1D8PCQ5) Pfam (PF16906) In PDB | Candida albicans SC5314 | |
29 | AA | 60S ribosomal protein L27 | polymer | 136 | 15551.4 | 1 | UniProt (A0A1D8PFG4) Pfam (PF01777) In PDB | Candida albicans SC5314 | |
30 | AB | Ribosomal 60S subunit protein L28 | polymer | 149 | 16703.4 | 1 | UniProt (A0A1D8PSC5) Pfam (PF00828) In PDB | Candida albicans SC5314 | |
31 | AC | 60S ribosomal protein L29 | polymer | 63 | 7135.3 | 1 | UniProt (A0A1D8PF57) Pfam (PF01779) In PDB | Candida albicans SC5314 | |
32 | AD | Ribosomal 60S subunit protein L30 | polymer | 106 | 11520.4 | 1 | UniProt (A0A1D8PM75) Pfam (PF01248) In PDB | Candida albicans SC5314 | |
33 | AE | Ribosomal 60S subunit protein L31B | polymer | 112 | 12993.1 | 1 | UniProt (A0A1D8PHF5) Pfam (PF01198) In PDB | Candida albicans SC5314 | |
34 | AF | Ribosomal 60S subunit protein L32 | polymer | 131 | 14993.7 | 1 | UniProt (A0A1D8PPN6) Pfam (PF01655) In PDB | Candida albicans SC5314 | |
35 | AG | Ribosomal 60S subunit protein L33A | polymer | 107 | 12138.2 | 1 | UniProt (A0A1D8PHH4) Pfam (PF01247) In PDB | Candida albicans SC5314 | |
36 | AH | Ribosomal 60S subunit protein L34B | polymer | 122 | 13774.3 | 1 | UniProt (A0A1D8PDZ1) Pfam (PF01199) In PDB | Candida albicans SC5314 | |
37 | AI | Ribosomal 60S subunit protein L35A | polymer | 120 | 14118.8 | 1 | UniProt (A0A1D8PK30) Pfam (PF00831) In PDB | Candida albicans SC5314 | |
38 | AJ | 60S ribosomal protein L36 | polymer | 99 | 11096.2 | 1 | UniProt (A0A1D8PH21) Pfam (PF01158) In PDB | Candida albicans SC5314 | |
39 | AK | Ribosomal protein L37 | polymer | 90 | 10102.8 | 1 | UniProt (A0A1D8PF45) Pfam (PF01907) In PDB | Candida albicans SC5314 | |
40 | AL | Ribosomal 60S subunit protein L38 | polymer | 78 | 8911.5 | 1 | UniProt (A0A1D8PG16) Pfam (PF01781) In PDB | Candida albicans SC5314 | |
41 | AM | 60S ribosomal protein L39 | polymer | 51 | 6347.5 | 1 | UniProt (A0A1D8PDT4) Pfam (PF00832) In PDB | Candida albicans SC5314 | |
42 | AN | Rpl40bp | polymer | 52 | 6078.4 | 1 | UniProt (A0A1D8PL68) Pfam (PF01020) In PDB | Candida albicans SC5314 | |
43 | AO | 60S ribosomal protein L41 | polymer | 25 | 3396.3 | 1 | Candida albicans SC5314 | ||
44 | AP | Ribosomal 60S subunit protein L42A | polymer | 106 | 12285.7 | 1 | UniProt (A0A1D8PEV4) Pfam (PF00935) In PDB | Candida albicans SC5314 | |
45 | AQ | Ribosomal 60S subunit protein L43A | polymer | 92 | 10136.8 | 1 | UniProt (A0A1D8PP14) Pfam (PF01780) In PDB | Candida albicans SC5314 | |
46 | i | HABP4_PAI-RBP1 domain-containing protein | polymer | 267 | 29126.1 | 1 | UniProt (A0A1D8PK71) Pfam (PF09598) In PDB | Candida albicans SC5314 | |
47 | A | 18S ribosomal RNA | polymer | 1787 | 575838.6 | 1 | Candida albicans SC5314 | ||
48 | B | 40S ribosomal protein S0 | polymer | 261 | 28759.3 | 1 | UniProt (O42817) Pfam (PF00318) In PDB | Candida albicans SC5314 | |
49 | C | 40S ribosomal protein S1 | polymer | 256 | 29041.9 | 1 | UniProt (P40910) Pfam (PF01015) In PDB | Candida albicans SC5314 | S3aE |
50 | D | Ribosomal 40S subunit protein S2 | polymer | 249 | 26917.3 | 1 | UniProt (Q5A900) Pfam (PF00333) Pfam (PF03719) In PDB | Candida albicans SC5314 | |
51 | E | Ribosomal 40S subunit protein S3 | polymer | 251 | 27313.6 | 1 | UniProt (A0A1D8PSV5) Pfam (PF07650) Pfam (PF00189) In PDB | Candida albicans SC5314 | |
52 | F | 40S ribosomal protein S4 | polymer | 262 | 29435.4 | 1 | UniProt (A0A1D8PCI6) Pfam (PF08071) Pfam (PF01479) Pfam (PF00900) Pfam (PF00467) Pfam (PF16121) In PDB | Candida albicans SC5314 | |
53 | G | Ribosomal 40S subunit protein S5 | polymer | 225 | 25319.9 | 1 | UniProt (Q5AG43) Pfam (PF00177) In PDB | Candida albicans SC5314 | |
54 | H | 40S ribosomal protein S6 | polymer | 236 | 27146.5 | 1 | UniProt (A0A1D8PL99) Pfam (PF01092) In PDB | Candida albicans SC5314 | |
55 | I | 40S ribosomal protein S7 | polymer | 186 | 21285.8 | 1 | UniProt (Q5AJ93) Pfam (PF01251) In PDB | Candida albicans SC5314 | |
56 | J | 40S ribosomal protein S8 | polymer | 206 | 22802.0 | 1 | UniProt (Q59T44) Pfam (PF01201) In PDB | Candida albicans SC5314 | |
57 | K | Ribosomal 40S subunit protein S9B | polymer | 189 | 21765.1 | 1 | UniProt (A0A1D8PGY8) Pfam (PF00163) Pfam (PF01479) In PDB | Candida albicans SC5314 | |
58 | L | Ribosomal 40S subunit protein S10A | polymer | 118 | 13836.8 | 1 | UniProt (A0A1D8PI15) Pfam (PF03501) In PDB | Candida albicans SC5314 | |
59 | M | Ribosomal 40S subunit protein S11A | polymer | 155 | 17638.6 | 1 | UniProt (A0A1D8PN83) Pfam (PF16205) Pfam (PF00366) In PDB | Candida albicans SC5314 | |
60 | N | 40S ribosomal protein S12 | polymer | 143 | 15715.9 | 1 | UniProt (Q5ADQ6) Pfam (PF01248) In PDB | Candida albicans SC5314 | |
61 | O | Ribosomal 40S subunit protein S13 | polymer | 151 | 16976.8 | 1 | UniProt (A0A1D8PPE0) Pfam (PF08069) Pfam (PF00312) In PDB | Candida albicans SC5314 | |
62 | P | Ribosomal 40S subunit protein S14B | polymer | 132 | 14052.1 | 1 | UniProt (A0A1D8PDT3) Pfam (PF00411) In PDB | Candida albicans SC5314 | |
63 | Q | Ribosomal 40S subunit protein S15 | polymer | 142 | 15967.8 | 1 | UniProt (A0A1D8PK22) Pfam (PF00203) In PDB | Candida albicans SC5314 | |
64 | R | Ribosomal 40S subunit protein S16A | polymer | 142 | 15769.5 | 1 | UniProt (A0A1D8PCW6) Pfam (PF00380) In PDB | Candida albicans SC5314 | |
65 | S | Ribosomal 40S subunit protein S17B | polymer | 137 | 15770.3 | 1 | UniProt (A0A1D8PEY9) Pfam (PF00833) In PDB | Candida albicans SC5314 | |
66 | T | Ribosomal 40S subunit protein S18B | polymer | 145 | 17023.8 | 1 | UniProt (A0A1D8PQQ5) Pfam (PF00416) In PDB | Candida albicans SC5314 | |
67 | U | Ribosomal 40S subunit protein S19A | polymer | 145 | 16097.2 | 1 | UniProt (A0A1D8PK61) Pfam (PF01090) In PDB | Candida albicans SC5314 | |
68 | V | Ribosomal 40S subunit protein S20 | polymer | 119 | 13366.5 | 1 | UniProt (Q5A389) Pfam (PF00338) In PDB | Candida albicans SC5314 | |
69 | W | 40S ribosomal protein S21 | polymer | 87 | 9652.8 | 1 | UniProt (A0A1D8PCG7) Pfam (PF01249) In PDB | Candida albicans SC5314 | |
70 | X | 40S ribosomal protein S22-B | polymer | 130 | 14807.2 | 1 | UniProt (P0CU35) Pfam (PF00410) In PDB | Candida albicans SC5314 | |
71 | Y | Ribosomal 40S subunit protein S23B | polymer | 145 | 16000.8 | 1 | UniProt (A0A1D8PDU3) Pfam (PF00164) In PDB | Candida albicans SC5314 | |
72 | Z | 40S ribosomal protein S24 | polymer | 135 | 15546.9 | 1 | UniProt (Q5A7K0) Pfam (PF01282) In PDB | Candida albicans SC5314 | |
73 | a | 40S ribosomal protein S25 | polymer | 105 | 11633.8 | 1 | UniProt (A0A1D8PNQ6) Pfam (PF03297) In PDB | Candida albicans SC5314 | |
74 | b | 40S ribosomal protein S26 | polymer | 119 | 13606.1 | 1 | UniProt (Q5ALV6) Pfam (PF01283) In PDB | Candida albicans SC5314 | |
75 | c | 40S ribosomal protein S27 | polymer | 82 | 8982.5 | 1 | UniProt (A0A1D8PTI7) Pfam (PF01667) In PDB | Candida albicans SC5314 | |
76 | d | Ribosomal 40S subunit protein S28B | polymer | 67 | 7536.8 | 1 | UniProt (A0A1D8PQN0) Pfam (PF01200) In PDB | Candida albicans SC5314 | |
77 | e | Ribosomal 40S subunit protein S29A | polymer | 56 | 6615.6 | 1 | UniProt (A0A1D8PTR4) Pfam (PF00253) In PDB | Candida albicans SC5314 | |
78 | f | 40S ribosomal protein S30 | polymer | 63 | 7127.4 | 1 | UniProt (A0A1D8PSK2) Pfam (PF04758) In PDB | Candida albicans SC5314 | |
79 | g | Ubiquitin-ribosomal 40S subunit protein S31 fusion protein | polymer | 193 | 22615.5 | 1 | UniProt (Q5A109) Pfam (PF00240) Pfam (PF01599) In PDB | Candida albicans SC5314 | |
80 | h | Guanine nucleotide-binding protein subunit beta-like protein | polymer | 317 | 34593.9 | 1 | UniProt (P83774) Pfam (PF00400) In PDB | Candida albicans SC5314 | Cytoplasmic antigenic protein 1 |
81 | 1 | SPERMIDINE | non-polymer | 145.2 | 2 | Chemie (SPD) | |||
82 | 1 | ANISOMYCIN | non-polymer | 265.3 | 1 | Chemie (ANM) | |||
83 | AK, AN, AP, AQ, b... | ZINC ION | non-polymer | 65.4 | 8 | Chemie (ZN) |
Sequence modifications
P: 1 - 132 (UniProt: A0A1D8PDT3)
PDB | External Database | Details |
---|---|---|
Ias 119 | Asp 119 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 80 |
Total formula weight | 3143782.0 | |
Non-Polymers* | Number of molecules | 11 |
Total formula weight | 1079.1 | |
All* | Total formula weight | 3144861.0 |