7Q0A
SARS-CoV-2 Spike ectodomain with Fab FI3A
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | Spike glycoprotein,Spike ectodomain,Spike protein S2' | polymer | 1316 | 145856.1 | 3 | UniProt (P0DTC2) UniProt (Q3I5J5) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV SARS-CoV-2) | S glycoprotein,E2,Peplomer protein |
| 2 | D (Y) | FI3A fab heavy chain | polymer | 116 | 12622.1 | 1 | Homo sapiens | ||
| 3 | E (Z) | FI3A fab Light chain | polymer | 107 | 11604.8 | 1 | Homo sapiens | ||
| 4 | F, G, H, I, J... (D, E, F, G, I...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 11 | In PDB GlyTouCan (G42666HT) | |||
| 5 | AA, BA, CA, DA, EA... (B, C, A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 27 | Chemie (NAG) |
Sequence modifications
A, B, C: 1 - 1208 (UniProt: P0DTC2)
A, B, C: 1209 - 1302 (PDB: 7Q0A)
A, B, C: 1303 - 1316 (UniProt: Q3I5J5)
| PDB | External Database | Details |
|---|---|---|
| Gly 682 | Arg 682 | conflict |
| Ser 683 | Arg 683 | conflict |
| Ser 685 | Arg 685 | conflict |
| Pro 986 | Lys 986 | conflict |
| Pro 987 | Val 987 | conflict |
A, B, C: 1303 - 1316 (UniProt: Q3I5J5)
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 461795.2 | |
| Branched | Number of molecules | 11 |
| Total formula weight | 4668.4 | |
| Non-Polymers* | Number of molecules | 27 |
| Total formula weight | 5972.6 | |
| All* | Total formula weight | 472436.2 |
