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7PZY

Structure of the vacant Candida albicans 80S ribosome

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1125S ribosomal RNApolymer33591085306.31GenBank (1078736431)Candida albicans SC5314
235S ribosomal RNApolymer12138943.11GenBank (1111963231)Candida albicans SC5314
345.8S ribosomal RNApolymer15850683.91GenBank (1817956650)Candida albicans SC5314
410Mixture of endogenous E-tRNAspolymer7624385.51Candida albicans SC5314
5jRibosomal 60S subunit protein L2Apolymer25427366.61UniProt (A0A1D8PF08)
Pfam (PF00181)
Pfam (PF03947)
In PDB
Candida albicans SC5314
6k60S ribosomal protein L3polymer38944040.81UniProt (Q59LS1)
Pfam (PF00297)
In PDB
Candida albicans SC5314
7lRibosomal 60S subunit protein L4Bpolymer36339282.41UniProt (A0A1D8PFV1)
Pfam (PF00573)
Pfam (PF14374)
In PDB
Candida albicans SC5314
8mRibosomal 60S subunit protein L5polymer29834558.01UniProt (Q5AGZ7)
Pfam (PF17144)
Pfam (PF14204)
In PDB
Candida albicans SC5314
9n60S ribosomal protein L6polymer17619798.01UniProt (A0A1D8PCX8)
Pfam (PF01159)
In PDB
Candida albicans SC5314
10oRibosomal 60S subunit protein L7Apolymer24127447.01UniProt (A0A1D8PDL6)
Pfam (PF08079)
Pfam (PF00327)
In PDB
Candida albicans SC5314
11p60S ribosomal protein L8polymer26228549.41UniProt (Q5ANA1)
Pfam (PF01248)
In PDB
Candida albicans SC5314
12qRibosomal 60S subunit protein L9Bpolymer19121755.21UniProt (Q5AEN2)
Pfam (PF00347)
In PDB
Candida albicans SC5314
13rRibosomal 60S subunit protein L10polymer22025236.31UniProt (Q5AIB8)
Pfam (PF00252)
In PDB
Candida albicans SC5314
14sRibosomal 60S subunit protein L11Bpolymer17419859.81UniProt (A0A1D8PHW1)
Pfam (PF00281)
Pfam (PF00673)
In PDB
Candida albicans SC5314
15t60S ribosomal protein L13polymer20223105.81UniProt (O59931)
Pfam (PF01294)
In PDB
Candida albicans SC5314
16uRibosomal 60S subunit protein L14Bpolymer13114748.51UniProt (A0A1D8PFL9)
Pfam (PF01929)
In PDB
Candida albicans SC5314
17vRibosomal protein L15polymer20424389.31UniProt (Q5A6R1)
Pfam (PF00827)
In PDB
Candida albicans SC5314
18wRibosomal 60S subunit protein L16Apolymer20022685.81UniProt (Q5AB87)
Pfam (PF00572)
In PDB
Candida albicans SC5314
19xRibosomal 60S subunit protein L17Bpolymer18521002.91UniProt (Q59TE0)
Pfam (PF00237)
In PDB
Candida albicans SC5314
20yRibosomal 60S subunit protein L18Apolymer18620817.41UniProt (A0A1D8PK43)
Pfam (PF17135)
In PDB
Candida albicans SC5314
21zRibosomal protein L19polymer19021942.81UniProt (A0A1D8PK40)
Pfam (PF01280)
In PDB
Candida albicans SC5314
22060S ribosomal protein L20polymer17220376.91UniProt (A0A1D8PLC9)
Pfam (PF01775)
In PDB
Candida albicans SC5314
232Ribosomal 60S subunit protein L21Apolymer16018049.91UniProt (A0A1D8PGY0)
Pfam (PF01157)
In PDB
Candida albicans SC5314
245Ribosomal 60S subunit protein L22Bpolymer12414107.91UniProt (A0A1D8PM41)
Pfam (PF01776)
In PDB
Candida albicans SC5314
256Ribosomal 60S subunit protein L23Bpolymer13714508.01UniProt (A0A1D8PPT5)
Pfam (PF00238)
In PDB
Candida albicans SC5314
267Ribosomal 60S subunit protein L24Apolymer15517430.31UniProt (Q5A6A1)
Pfam (PF01246)
In PDB
Candida albicans SC5314
278Ribosomal 60S subunit protein L25polymer14215873.61UniProt (A0A1D8PPS1)
Pfam (PF03939)
Pfam (PF00276)
In PDB
Candida albicans SC5314
289Ribosomal 60S subunit protein L26Bpolymer12714215.51UniProt (A0A1D8PCQ5)
Pfam (PF16906)
In PDB
Candida albicans SC5314
29AA60S ribosomal protein L27polymer13615551.41UniProt (A0A1D8PFG4)
Pfam (PF01777)
In PDB
Candida albicans SC5314
30ABRibosomal 60S subunit protein L28polymer14916703.41UniProt (A0A1D8PSC5)
Pfam (PF00828)
In PDB
Candida albicans SC5314
31AC60S ribosomal protein L29polymer637135.31UniProt (A0A1D8PF57)
Pfam (PF01779)
In PDB
Candida albicans SC5314
32ADRibosomal 60S subunit protein L30polymer10611520.41UniProt (A0A1D8PM75)
Pfam (PF01248)
In PDB
Candida albicans SC5314
33AERibosomal 60S subunit protein L31Bpolymer11212993.11UniProt (A0A1D8PHF5)
Pfam (PF01198)
In PDB
Candida albicans SC5314
34AFRibosomal 60S subunit protein L32polymer13114993.71UniProt (A0A1D8PPN6)
Pfam (PF01655)
In PDB
Candida albicans SC5314
35AGRibosomal 60S subunit protein L33Apolymer10712138.21UniProt (A0A1D8PHH4)
Pfam (PF01247)
In PDB
Candida albicans SC5314
36AHRibosomal 60S subunit protein L34Bpolymer12213774.31UniProt (A0A1D8PDZ1)
Pfam (PF01199)
In PDB
Candida albicans SC5314
37AIRibosomal 60S subunit protein L35Apolymer12014118.81UniProt (A0A1D8PK30)
Pfam (PF00831)
In PDB
Candida albicans SC5314
38AJ60S ribosomal protein L36polymer9911096.21UniProt (A0A1D8PH21)
Pfam (PF01158)
In PDB
Candida albicans SC5314
39AKRibosomal protein L37polymer9010102.81UniProt (A0A1D8PF45)
Pfam (PF01907)
In PDB
Candida albicans SC5314
40ALRibosomal 60S subunit protein L38polymer788911.51UniProt (A0A1D8PG16)
Pfam (PF01781)
In PDB
Candida albicans SC5314
41AM60S ribosomal protein L39polymer516347.51UniProt (A0A1D8PDT4)
Pfam (PF00832)
In PDB
Candida albicans SC5314
42ANRpl40bppolymer526078.41UniProt (A0A1D8PL68)
Pfam (PF01020)
In PDB
Candida albicans SC5314
43AO60S ribosomal protein L41polymer253396.31UniProt (A0A2V1AQU0)
Pfam (PF05162)
In PDB
Candida albicans SC5314
44APRibosomal 60S subunit protein L42Apolymer10612285.71UniProt (A0A1D8PEV4)
Pfam (PF00935)
In PDB
Candida albicans SC5314
45AQRibosomal 60S subunit protein L43Apolymer9210136.81UniProt (A0A1D8PP14)
Pfam (PF01780)
In PDB
Candida albicans SC5314
46iHABP4_PAI-RBP1 domain-containing proteinpolymer26729126.11UniProt (A0A1D8PK71)
Pfam (PF09598)
In PDB
Candida albicans SC5314
47A18S ribosomal RNApolymer1787575838.61GenBank (1078736431)Candida albicans SC5314
48B40S ribosomal protein S0polymer26128759.31UniProt (O42817)
Pfam (PF00318)
In PDB
Candida albicans SC5314
49C40S ribosomal protein S1polymer25629041.91UniProt (P40910)
Pfam (PF01015)
In PDB
Candida albicans SC5314S3aE
50DRibosomal 40S subunit protein S2polymer24926917.31UniProt (Q5A900)
Pfam (PF00333)
Pfam (PF03719)
In PDB
Candida albicans SC5314
51ERibosomal 40S subunit protein S3polymer25127313.61UniProt (A0A1D8PSV5)
Pfam (PF07650)
Pfam (PF00189)
In PDB
Candida albicans SC5314
52F40S ribosomal protein S4polymer26229435.41UniProt (A0A1D8PCI6)
Pfam (PF08071)
Pfam (PF01479)
Pfam (PF00900)
Pfam (PF00467)
Pfam (PF16121)
In PDB
Candida albicans SC5314
53GRibosomal 40S subunit protein S5polymer22525319.91UniProt (Q5AG43)
Pfam (PF00177)
In PDB
Candida albicans SC5314
54H40S ribosomal protein S6polymer23627146.51UniProt (A0A1D8PL99)
Pfam (PF01092)
In PDB
Candida albicans SC5314
55I40S ribosomal protein S7polymer18621285.81UniProt (Q5AJ93)
Pfam (PF01251)
In PDB
Candida albicans SC5314
56J40S ribosomal protein S8polymer20622802.01UniProt (Q59T44)
Pfam (PF01201)
In PDB
Candida albicans SC5314
57KRibosomal 40S subunit protein S9Bpolymer18921765.11UniProt (A0A1D8PGY8)
Pfam (PF00163)
Pfam (PF01479)
In PDB
Candida albicans SC5314
58LRibosomal 40S subunit protein S10Apolymer11813836.81UniProt (A0A1D8PI15)
Pfam (PF03501)
In PDB
Candida albicans SC5314
59MRibosomal 40S subunit protein S11Apolymer15517638.61UniProt (A0A1D8PN83)
Pfam (PF16205)
Pfam (PF00366)
In PDB
Candida albicans SC5314
60N40S ribosomal protein S12polymer14315715.91UniProt (Q5ADQ6)
Pfam (PF01248)
In PDB
Candida albicans SC5314
61ORibosomal 40S subunit protein S13polymer15116976.81UniProt (A0A1D8PPE0)
Pfam (PF08069)
Pfam (PF00312)
In PDB
Candida albicans SC5314
62PRibosomal 40S subunit protein S14Bpolymer13214052.11UniProt (A0A1D8PDT3)
Pfam (PF00411)
In PDB
Candida albicans SC5314
63QRibosomal 40S subunit protein S15polymer14215967.81UniProt (A0A1D8PK22)
Pfam (PF00203)
In PDB
Candida albicans SC5314
64RRibosomal 40S subunit protein S16Apolymer14215769.51UniProt (A0A1D8PCW6)
Pfam (PF00380)
In PDB
Candida albicans SC5314
65SRibosomal 40S subunit protein S17Bpolymer13715770.31UniProt (A0A1D8PEY9)
Pfam (PF00833)
In PDB
Candida albicans SC5314
66TRibosomal 40S subunit protein S18Bpolymer14517023.81UniProt (A0A1D8PQQ5)
Pfam (PF00416)
In PDB
Candida albicans SC5314
67URibosomal 40S subunit protein S19Apolymer14516097.21UniProt (A0A1D8PK61)
Pfam (PF01090)
In PDB
Candida albicans SC5314
68VRibosomal 40S subunit protein S20polymer11913366.51UniProt (Q5A389)
Pfam (PF00338)
In PDB
Candida albicans SC5314
69W40S ribosomal protein S21polymer879652.81UniProt (A0A1D8PCG7)
Pfam (PF01249)
In PDB
Candida albicans SC5314
70X40S ribosomal protein S22-Apolymer13014807.21UniProt (Q96W54)
Pfam (PF00410)
In PDB
Candida albicans SC5314
71YRibosomal 40S subunit protein S23Bpolymer14516000.81UniProt (A0A1D8PDU3)
Pfam (PF00164)
In PDB
Candida albicans SC5314
72Z40S ribosomal protein S24polymer13515546.91UniProt (Q5A7K0)
Pfam (PF01282)
In PDB
Candida albicans SC5314
73a40S ribosomal protein S25polymer10511633.81UniProt (A0A1D8PNQ6)
Pfam (PF03297)
In PDB
Candida albicans SC5314
74b40S ribosomal protein S26polymer11913606.11UniProt (Q5ALV6)
Pfam (PF01283)
In PDB
Candida albicans SC5314
75c40S ribosomal protein S27polymer828982.51UniProt (A0A1D8PTI7)
Pfam (PF01667)
In PDB
Candida albicans SC5314
76dRibosomal 40S subunit protein S28Bpolymer677536.81UniProt (A0A1D8PQN0)
Pfam (PF01200)
In PDB
Candida albicans SC5314
77eRibosomal 40S subunit protein S29Apolymer566615.61UniProt (A0A1D8PTR4)
Pfam (PF00253)
In PDB
Candida albicans SC5314
78f40S ribosomal protein S30polymer637127.41UniProt (A0A1D8PSK2)
Pfam (PF04758)
In PDB
Candida albicans SC5314
79gUbiquitin-ribosomal 40S subunit protein S31 fusion proteinpolymer19322615.51UniProt (Q5A109)
Pfam (PF00240)
Pfam (PF01599)
In PDB
Candida albicans SC5314
80hGuanine nucleotide-binding protein subunit beta-like proteinpolymer31734593.91UniProt (P83774)
Pfam (PF00400)
In PDB
Candida albicans SC5314Cytoplasmic antigenic protein 1
811SPERMIDINEnon-polymer145.210Chemie (SPD)
821, 41,4-DIAMINOBUTANEnon-polymer88.22Chemie (PUT)
831, k, A, o, r...MAGNESIUM IONnon-polymer24.3443Chemie (MG)
84AK, AN, AP, AQ, b...ZINC IONnon-polymer65.48Chemie (ZN)
85waterwater18.01361Chemie (HOH)
Sequence modifications
P: 1 - 132 (UniProt: A0A1D8PDT3)
PDBExternal DatabaseDetails
Ias 119Asp 119conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains80
Total formula weight3143436.8
Non-Polymers*Number of molecules463
Total formula weight12919.1
All*Total formula weight3156355.9
*Water molecules are not included.

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PDB entries from 2024-08-28

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