7PWG
Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (1) | rRNA 28S | polymer | 2707 | 878254.5 | 1 | Giardia lamblia ATCC 50803 (Giardia lamblia) | ||
| 2 | B (3) | rRNA 5S | polymer | 120 | 38671.0 | 1 | Giardia lamblia ATCC 50803 (Giardia lamblia) | ||
| 3 | C (4) | rRNA 5.8S | polymer | 139 | 44972.0 | 1 | Giardia lamblia ATCC 50803 (Giardia lamblia) | ||
| 4 | D (A) | Ribosomal protein L2 | polymer | 251 | 27090.5 | 1 | UniProt (E2RTN4) Pfam (PF00181) Pfam (PF03947) | Giardia lamblia ATCC 50803 | Ribosomal protein L8 |
| 5 | E (B) | Ribosomal protein L3 | polymer | 379 | 42715.5 | 1 | UniProt (A8BRZ3) Pfam (PF00297) | Giardia lamblia ATCC 50803 | |
| 6 | F (C) | Ribosomal protein L4 | polymer | 316 | 35048.7 | 1 | UniProt (A8B7H8) Pfam (PF00573) Pfam (PF14374) | Giardia lamblia ATCC 50803 | |
| 7 | G (D) | Ribosomal protein L5 | polymer | 297 | 33961.4 | 1 | UniProt (E2RU47) Pfam (PF17144) Pfam (PF14204) | Giardia lamblia ATCC 50803 | |
| 8 | H (F) | Ribosomal protein L7 | polymer | 235 | 27103.4 | 1 | UniProt (A8BRY6) Pfam (PF00327) | Giardia lamblia ATCC 50803 | |
| 9 | I (G) | 60S ribosomal protein L7a | polymer | 225 | 25427.7 | 1 | UniProt (A8BLL7) Pfam (PF01248) | Giardia lamblia ATCC 50803 | |
| 10 | J (H) | Ribosomal protein L6 | polymer | 185 | 20889.4 | 1 | UniProt (A8BNT5) Pfam (PF00347) | Giardia lamblia ATCC 50803 | Ribosomal protein L9 |
| 11 | K (I) | Ribosomal protein L10 | polymer | 210 | 24283.2 | 1 | UniProt (A8BM86) Pfam (PF00252) | Giardia lamblia ATCC 50803 | |
| 12 | L (J) | Ribosomal protein L11 | polymer | 173 | 19767.7 | 1 | UniProt (A8BI95) Pfam (PF00281) Pfam (PF00673) | Giardia lamblia ATCC 50803 | |
| 13 | M (L) | 60S ribosomal protein L13 | polymer | 234 | 26640.3 | 1 | UniProt (A8B6M8) | Giardia lamblia ATCC 50803 | |
| 14 | N (M) | Ribosomal protein L14 | polymer | 131 | 14785.5 | 1 | UniProt (A8B4F8) Pfam (PF01929) | Giardia lamblia ATCC 50803 | |
| 15 | O (N) | Ribosomal protein L15 | polymer | 204 | 24353.7 | 1 | UniProt (A8B8Z6) Pfam (PF00827) | Giardia lamblia ATCC 50803 | |
| 16 | P (O) | Ribosomal protein L13a | polymer | 197 | 22921.9 | 1 | UniProt (A8BU75) Pfam (PF00572) | Giardia lamblia ATCC 50803 | |
| 17 | Q (P) | Ribosomal protein L17 | polymer | 164 | 18722.8 | 1 | UniProt (A8BE76) Pfam (PF00237) | Giardia lamblia ATCC 50803 | |
| 18 | R (Q) | Ribosomal protein L18 | polymer | 179 | 20207.8 | 1 | UniProt (A8B4T7) Pfam (PF17135) | Giardia lamblia ATCC 50803 | |
| 19 | S (R) | Ribosomal protein L19 | polymer | 196 | 23199.2 | 1 | UniProt (A8BH61) Pfam (PF01280) Pfam (PF25476) | Giardia lamblia ATCC 50803 | |
| 20 | T (S) | 60S ribosomal protein L18a | polymer | 173 | 20624.9 | 1 | UniProt (A8BT04) | Giardia lamblia ATCC 50803 | |
| 21 | U (T) | Ribosomal protein L21 | polymer | 159 | 18296.4 | 1 | UniProt (A8B2Q4) Pfam (PF01157) | Giardia lamblia ATCC 50803 | |
| 22 | V (U) | Ribosomal protein eL22 | polymer | 171 | 19942.4 | 1 | UniProt (A8BW84) | Giardia lamblia ATCC 50803 | |
| 23 | W (V) | Ribosomal protein L23 | polymer | 142 | 15450.0 | 1 | UniProt (A8BS37) Pfam (PF00238) | Giardia lamblia ATCC 50803 | |
| 24 | X (X) | Ribosomal protein L23A | polymer | 141 | 16053.9 | 1 | UniProt (A8BMP6) Pfam (PF03939) Pfam (PF00276) | Giardia lamblia ATCC 50803 | |
| 25 | Y (Y) | Ribosomal protein L26 | polymer | 135 | 15621.4 | 1 | UniProt (A8BFT3) Pfam (PF16906) | Giardia lamblia ATCC 50803 | |
| 26 | Z (Z) | 60S ribosomal protein L27 | polymer | 135 | 15374.9 | 1 | UniProt (A8B1T3) Pfam (PF00467) Pfam (PF01777) | Giardia lamblia ATCC 50803 | |
| 27 | AA (a) | Ribosomal protein L27a | polymer | 149 | 17167.0 | 1 | UniProt (A8BZ78) Pfam (PF00828) | Giardia lamblia ATCC 50803 | |
| 28 | BA (b) | 60S ribosomal protein L29 | polymer | 62 | 7363.6 | 1 | UniProt (A8BYY2) Pfam (PF01779) | Giardia lamblia ATCC 50803 | |
| 29 | CA (c) | Ribosomal protein L30 | polymer | 109 | 11698.6 | 1 | UniProt (A8B5N7) Pfam (PF01248) | Giardia lamblia ATCC 50803 | |
| 30 | DA (d) | Ribosomal protein L31B | polymer | 106 | 12184.1 | 1 | UniProt (A8BMP3) Pfam (PF01198) | Giardia lamblia ATCC 50803 | Ribosomal protein L31e |
| 31 | EA (e) | Ribosomal protein L32 | polymer | 136 | 15986.0 | 1 | UniProt (A8BMD9) Pfam (PF01655) | Giardia lamblia ATCC 50803 | |
| 32 | FA (f) | Ribosomal protein L35a | polymer | 123 | 13913.1 | 1 | UniProt (A8BKK5) Pfam (PF01247) | Giardia lamblia ATCC 50803 | |
| 33 | GA (g) | Ribosomal protein L34 | polymer | 120 | 13528.8 | 1 | UniProt (A8BMF7) Pfam (PF01199) | Giardia lamblia ATCC 50803 | |
| 34 | HA (h) | Ribosomal protein L29 | polymer | 124 | 14292.2 | 1 | UniProt (A0A644FBK5) Pfam (PF00831) | Giardia lamblia ATCC 50803 | |
| 35 | IA (i) | Ribosomal protein L36-1 | polymer | 90 | 10586.7 | 1 | UniProt (A8BYA6) Pfam (PF01158) | Giardia lamblia ATCC 50803 | Ribosomal protein L36e |
| 36 | JA (j) | Ribosomal protein L37 | polymer | 89 | 10329.0 | 1 | UniProt (A8BLV7) Pfam (PF01907) | Giardia lamblia ATCC 50803 | |
| 37 | KA (k) | Ribosomal L38e | polymer | 77 | 8605.1 | 1 | UniProt (A8B481) Pfam (PF01781) | Giardia lamblia ATCC 50803 | |
| 38 | LA (l) | Ribosomal protein L39 | polymer | 51 | 6353.7 | 1 | UniProt (A0A644EZB9) Pfam (PF00832) | Giardia lamblia ATCC 50803 | |
| 39 | MA (m) | Ubiquitin/Ribosomal protein L40e | polymer | 127 | 14343.7 | 1 | UniProt (A8BXE1) Pfam (PF00240) Pfam (PF01020) | Giardia lamblia ATCC 50803 | Ubiquitin/ribosomal protein CEP52 |
| 40 | NA (o) | Ribosomal protein L44 | polymer | 106 | 12311.7 | 1 | UniProt (A8BQU8) Pfam (PF00935) | Giardia lamblia ATCC 50803 | |
| 41 | OA (p) | Ribosomal protein L37a | polymer | 94 | 10508.4 | 1 | UniProt (A8BN26) Pfam (PF01780) | Giardia lamblia ATCC 50803 | |
| 42 | PA (w) | E-site tRNA | polymer | 76 | 24500.6 | 1 | Giardia lamblia ATCC 50803 (Giardia lamblia) | ||
| 43 | QA (W) | Ribosomal protein L24A | polymer | 102 | 12005.2 | 1 | UniProt (A8BRH7) Pfam (PF01246) | Giardia lamblia ATCC 50803 | |
| 44 | RA (E) | P-site tRNA | polymer | 3 | 894.6 | 1 | Giardia lamblia ATCC 50803 (Giardia lamblia) | ||
| 45 | AB, AC, AD, AE, AL... (1, 4, C, F, I...) | MAGNESIUM ION | non-polymer | 24.3 | 112 | Chemie (MG) | |||
| 46 | AF, AG, AH, AI, AJ... (1, A, B, C, I...) | POTASSIUM ION | non-polymer | 39.1 | 181 | Chemie (K) | |||
| 47 | UK (1) | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 1 | Chemie (PGE) | |||
| 48 | AM, AN, BM, BN, CM... (1, a, 3, b, 4...) | water | water | 18.0 | 4397 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 44 |
| Total formula weight | 1706952.1 | |
| Non-Polymers* | Number of molecules | 294 |
| Total formula weight | 9949.1 | |
| All* | Total formula weight | 1716901.2 |
