7PS7
Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with Beta-40 Fab
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (E, R) | Spike protein S1 | polymer | 210 | 23646.6 | 2 | UniProt (P0DTC2) Pfam (PF09408) | Severe acute respiratory syndrome coronavirus 2 | |
| 2 | C, D (L, B) | Beta-40 Fab light chain | polymer | 213 | 22604.0 | 2 | Homo sapiens (Human) | ||
| 3 | E, F (A, H) | Beta-40 heavy chain | polymer | 228 | 24039.8 | 2 | Homo sapiens (Human) |
Sequence modifications
E, R: 333 - 526 (UniProt: P0DTC2)
| PDB | External Database | Details |
|---|---|---|
| Met 319 | - | initiating methionine |
| Gly 320 | - | expression tag |
| Cys 321 | - | expression tag |
| Val 322 | - | expression tag |
| Ala 323 | - | expression tag |
| Glu 324 | - | expression tag |
| Thr 325 | - | expression tag |
| Gly 326 | - | expression tag |
| His 327 | - | expression tag |
| His 328 | - | expression tag |
| His 329 | - | expression tag |
| His 330 | - | expression tag |
| His 331 | - | expression tag |
| His 332 | - | expression tag |
| Asn 417 | Lys 417 | variant |
| Lys 484 | Glu 484 | variant |
| Tyr 501 | Asn 501 | variant |
| Lys 527 | - | expression tag |
| Lys 528 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 140580.7 | |
| All* | Total formula weight | 140580.7 |






