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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

7PNT

Assembly intermediate of mouse mitochondrial ribosome small subunit without mS37 in complex with RbfA and Tfb1m

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A12S mitochondrial rRNApolymer956306793.31Mus musculus (Mouse)
2B28S ribosomal protein S2, mitochondrialpolymer29132357.21UniProt (Q924T2)
Pfam (PF00318)
In PDB		Mus musculus (Mouse)MRP-S2,S2mt
3C28S ribosomal protein S24, mitochondrialpolymer16718934.11UniProt (Q9CQV5)
Pfam (PF14955)
In PDB		Mus musculus (Mouse)MRP-S24,S24mt
4D28S ribosomal protein S5, mitochondrialpolymer43248293.61UniProt (Q99N87)
Pfam (PF00333)
Pfam (PF03719)
Pfam (PF21251)
In PDB		Mus musculus (Mouse)MRP-S5,S5mt
5E28S ribosomal protein S6, mitochondrialpolymer12514333.61UniProt (P58064)
Pfam (PF01250)
In PDB		Mus musculus (Mouse)MRP-S6,S6mt
6F28S ribosomal protein S7, mitochondrialpolymer24228112.91UniProt (Q80X85)
Pfam (PF00177)
In PDB		Mus musculus (Mouse)MRP-S7,S7mt
7G28S ribosomal protein S9, mitochondrialpolymer39044997.41UniProt (Q9D7N3)
Pfam (PF00380)
In PDB		Mus musculus (Mouse)MRP-S9,S9mt
8H28S ribosomal protein S10, mitochondrialpolymer16018729.81UniProt (Q80ZK0)
Pfam (PF00338)
In PDB		Mus musculus (Mouse)MRP-S10,S10mt
9I28S ribosomal protein S11, mitochondrialpolymer19120252.21UniProt (Q9DCA2)
Pfam (PF00411)
In PDB		Mus musculus (Mouse)MRP-S11,S11mt
10J28S ribosomal protein S12, mitochondrialpolymer13915469.31UniProt (O35680)
Pfam (PF00164)
In PDB		Mus musculus (Mouse)MRP-S12,S12mt,MT-RPS12
11K28S ribosomal protein S14, mitochondrialpolymer12814949.61UniProt (Q9CR88)
Pfam (PF00253)
In PDB		Mus musculus (Mouse)MRP-S14,S14mt
12L28S ribosomal protein S15, mitochondrialpolymer25829523.71UniProt (Q9DC71)
Pfam (PF00312)
In PDB		Mus musculus (Mouse)MRP-S15,S15mt
13M28S ribosomal protein S16, mitochondrialpolymer13515218.71UniProt (Q9CPX7)
Pfam (PF00886)
In PDB		Mus musculus (Mouse)MRP-S16,S16mt
14N28S ribosomal protein S17, mitochondrialpolymer12013405.91UniProt (Q9CQE3)
Pfam (PF00366)
In PDB		Mus musculus (Mouse)MRP-S17,S17mt
15O28S ribosomal protein S18b, mitochondrialpolymer25428740.71UniProt (Q99N84)
Pfam (PF01084)
In PDB		Mus musculus (Mouse)MRP-S18-b,Mrps18-b,S18mt-b,28S ribosomal protein S18-2,mitochondrial,MRP-S18-2
16P28S ribosomal protein S18c, mitochondrialpolymer14316300.11UniProt (Q8R2L5)
Pfam (PF01084)
In PDB		Mus musculus (Mouse)MRP-S18-c,Mrps18-c,S18mt-c,28S ribosomal protein S18-1,mitochondrial,MRP-S18-1
17Q28S ribosomal protein S21, mitochondrialpolymer8610493.21UniProt (P58059)
Pfam (PF01165)
In PDB		Mus musculus (Mouse)MRP-S21,S21mt
18R28S ribosomal protein S22, mitochondrialpolymer35941255.11UniProt (Q9CXW2)
Pfam (PF10245)
In PDB		Mus musculus (Mouse)MRP-S22,S22mt
19S28S ribosomal protein S23, mitochondrialpolymer17720378.11UniProt (Q8VE22)
Pfam (PF10484)
In PDB		Mus musculus (Mouse)MRP-S23,S23mt
20T28S ribosomal protein S25, mitochondrialpolymer17119950.41UniProt (Q9D125)
Pfam (PF05047)
In PDB		Mus musculus (Mouse)MRP-S25,S25mt
21U28S ribosomal protein S26, mitochondrialpolymer20023484.81UniProt (Q80ZS3)
Pfam (PF14943)
In PDB		Mus musculus (Mouse)MRP-S26,S26mt
22V28S ribosomal protein S27, mitochondrialpolymer41547836.41UniProt (Q8BK72)
Pfam (PF10037)
In PDB		Mus musculus (Mouse)MRP-S27,S27mt,Mitochondrial ribosomal protein S27
23W28S ribosomal protein S28, mitochondrialpolymer18620555.31UniProt (Q9CY16)
Pfam (PF10246)
In PDB		Mus musculus (Mouse)MRP-S28,S28mt
24X28S ribosomal protein S29, mitochondrialpolymer39144766.31UniProt (Q9ER88)
Pfam (PF10236)
In PDB		Mus musculus (Mouse)MRP-S29,S29mt,Death-associated protein 3,DAP-3
25Y28S ribosomal protein S31, mitochondrialpolymer38443950.81UniProt (Q61733)
Pfam (PF15433)
In PDB		Mus musculus (Mouse)MRP-S31,S31mt,Imogen 38
26Z28S ribosomal protein S33, mitochondrialpolymer10612487.51UniProt (Q9D2R8)
Pfam (PF08293)
In PDB		Mus musculus (Mouse)MRP-S33,S33mt,Ganglioside-induced differentiation-associated-protein 3
27028S ribosomal protein S34, mitochondrialpolymer21825874.81UniProt (Q9JIK9)
Pfam (PF16053)
In PDB		Mus musculus (Mouse)MRP-S34,S34mt,T-complex expressed gene 2 protein
28128S ribosomal protein S35, mitochondrialpolymer32036028.31UniProt (Q8BJZ4)
Pfam (PF10213)
In PDB		Mus musculus (Mouse)MRP-S35,S35mt
293Aurora kinase A-interacting proteinpolymer20023345.41UniProt (Q9DCJ7)
Pfam (PF08213)
In PDB		Mus musculus (Mouse)AURKA-interacting protein,28S ribosomal protein S38,mitochondrial,MRP-S38
304Pentatricopeptide repeat domain-containing protein 3, mitochondrialpolymer68577890.01UniProt (Q14C51)
Pfam (PF22330)
Pfam (PF13812)
In PDB		Mus musculus (Mouse)28S ribosomal protein S39,mitochondrial,MRP-S39
31aPutative ribosome-binding factor A, mitochondrialpolymer35039382.31UniProt (Q6P3B9)
Pfam (PF02033)
In PDB		Mus musculus (Mouse)
32cDimethyladenosine transferase 1, mitochondrialpolymer34539019.61UniProt (Q8JZM0)
Pfam (PF00398)
In PDB		Mus musculus (Mouse)Mitochondrial 12S rRNA dimethylase 1,Mitochondrial transcription factor B1,mtTFB1,S-adenosylmethionine-6-N',N'-adenosyl(rRNA) dimethyltransferase 1
33A, B, XMAGNESIUM IONnon-polymer24.334Chemie (MG)
34APOTASSIUM IONnon-polymer39.17Chemie (K)
35OZINC IONnon-polymer65.41Chemie (ZN)
36P, TFE2/S2 (INORGANIC) CLUSTERnon-polymer175.82Chemie (FES)
37XADENOSINE-5'-TRIPHOSPHATEnon-polymer507.21Chemie (ATP)
38waterwater18.0470Chemie (HOH)
Sequence modifications
I: 1 - 191 (UniProt: Q9DCA2)
PDBExternal DatabaseDetails
5f0 181Asn 181conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains32
Total formula weight1193110.4
Non-Polymers*Number of molecules45
Total formula weight2024.3
All*Total formula weight1195134.7
*Water molecules are not included.

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PDB entries from 2024-07-10

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