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7PLJ

Structure of Polyphosphate kinase 2 from Deinococcus radiodurans, in complex with ATP and polyphosphates.

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, DPPK2 domain-containing proteinpolymer26630549.44UniProt (Q9RY20)
Pfam (PF03976)
In PDB
Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
2D, A, B, CADENOSINE-5'-TRIPHOSPHATEnon-polymer507.28Chemie (ATP)
3D, AADENOSINE-5'-DIPHOSPHATEnon-polymer427.22Chemie (ADP)
4ATRIPHOSPHATEnon-polymer258.01Chemie (3PO)
5ATetraphosphatenon-polymer337.91Chemie (7TT)
6D, A, B, CGLYCEROLnon-polymer92.16Chemie (GOL)
7D, A, B, CMAGNESIUM IONnon-polymer24.34Chemie (MG)
8D, B, CDI(HYDROXYETHYL)ETHERnon-polymer106.15Chemie (PEG)
9B, CPYROPHOSPHATEnon-polymer178.03Chemie (PPV)
10DPHOSPHATE IONnon-polymer95.01Chemie (PO4)
11waterwater18.01256Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight122197.8
Non-Polymers*Number of molecules31
Total formula weight7317.0
All*Total formula weight129514.8
*Water molecules are not included.

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PDB entries from 2024-07-17

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