7PKQ
Small subunit of the Chlamydomonas reinhardtii mitoribosome
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (B) | mS35 | polymer | 883 | 88892.8 | 1 | UniProt (A0A2K3CST5) | Chlamydomonas reinhardtii | |
| 2 | B (C) | mS45 | polymer | 999 | 102234.5 | 1 | UniProt (A0A2K3DM91) | Chlamydomonas reinhardtii | |
| 3 | C (D) | mS45-insert | polymer | 425 | 36187.6 | 1 | Chlamydomonas reinhardtii (Chlamydomonas smithii) | ||
| 4 | D (K) | mS31/46 | polymer | 186 | 15847.5 | 1 | Chlamydomonas reinhardtii (Chlamydomonas smithii) | ||
| 5 | E, F, G (L, M, N) | mS105 | polymer | 271 | 28879.0 | 3 | UniProt (A0A2K3DAY3) Pfam (PF02330) | Chlamydomonas reinhardtii (Chlamydomonas smithii) | |
| 6 | H (O) | mS106 | polymer | 516 | 51927.3 | 1 | UniProt (A0A2K3DZV7) | Chlamydomonas reinhardtii | |
| 7 | I (P) | mS107 | polymer | 416 | 43833.2 | 1 | UniProt (A0A2K3CRX4) | Chlamydomonas reinhardtii | |
| 8 | J (U) | Unk1 | polymer | 33 | 2826.5 | 1 | Chlamydomonas reinhardtii (Chlamydomonas smithii) | ||
| 9 | K (V) | Unk2 | polymer | 152 | 12954.0 | 1 | Chlamydomonas reinhardtii (Chlamydomonas smithii) | ||
| 10 | L (W) | Unk3 | polymer | 54 | 4613.7 | 1 | Chlamydomonas reinhardtii (Chlamydomonas smithii) | ||
| 11 | M (X) | Unk4 | polymer | 81 | 6911.5 | 1 | Chlamydomonas reinhardtii (Chlamydomonas smithii) | ||
| 12 | N (Y) | Unk5 | polymer | 108 | 9209.3 | 1 | Chlamydomonas reinhardtii (Chlamydomonas smithii) | ||
| 13 | O (Z) | Unk6 | polymer | 571 | 48613.0 | 1 | Chlamydomonas reinhardtii (Chlamydomonas smithii) | ||
| 14 | P (d) | uS4m | polymer | 415 | 43497.9 | 1 | UniProt (A0A2K3E198) | Chlamydomonas reinhardtii | |
| 15 | Q (f) | Mitochondrial ribosomal protein S6 | polymer | 122 | 13661.9 | 1 | UniProt (A8JGX6) Pfam (PF01250) | Chlamydomonas reinhardtii | |
| 16 | R (p) | bS16m | polymer | 88 | 10058.3 | 1 | UniProt (A0A2K3D9S4) Pfam (PF00886) | Chlamydomonas reinhardtii | |
| 17 | S (r) | bS18m | polymer | 356 | 36901.2 | 1 | UniProt (A0A2K3DDW6) Pfam (PF01084) | Chlamydomonas reinhardtii | |
| 18 | T (w) | mS26 | polymer | 193 | 22474.7 | 1 | UniProt (A8J4B1) Pfam (PF14943) UniProt (by SIFTS) (A0A2K3DGK2) | Chlamydomonas reinhardtii | |
| 19 | U (1) | S1 rRNA | polymer | 101 | 32590.3 | 1 | GenBank (12503) | Chlamydomonas reinhardtii | |
| 20 | V (4) | S4 rRNA | polymer | 415 | 133231.1 | 1 | Chlamydomonas reinhardtii (Chlamydomonas smithii) | ||
| 21 | W (2) | S2 rRNA | polymer | 213 | 68527.4 | 1 | GenBank (12503) | Chlamydomonas reinhardtii | |
| 22 | X (3) | S3 rRNA | polymer | 393 | 126928.1 | 1 | GenBank (12503) | Chlamydomonas reinhardtii | |
| 23 | Y (a) | bS1m | polymer | 253 | 26942.6 | 1 | UniProt (A8IB56) | Chlamydomonas reinhardtii | |
| 24 | Z (b) | uS2m | polymer | 530 | 53354.3 | 1 | UniProt (A0A2K3CXL0) Pfam (PF00318) Pfam (PF01391) | Chlamydomonas reinhardtii | |
| 25 | AA (e) | S5 DRBM domain-containing protein | polymer | 368 | 38876.6 | 1 | UniProt (A0A2K3DFB5) Pfam (PF00333) Pfam (PF03719) | Chlamydomonas reinhardtii | |
| 26 | BA (o) | uS15m | polymer | 319 | 34706.7 | 1 | UniProt (A0A2K3CQY8) Pfam (PF00312) | Chlamydomonas reinhardtii | |
| 27 | CA (z) | mS34 | polymer | 133 | 14287.2 | 1 | UniProt (A8J254) Pfam (PF16053) UniProt (by SIFTS) (A0A2K3DPT3) | Chlamydomonas reinhardtii | |
| 28 | DA (v) | mS23 | polymer | 190 | 20813.6 | 1 | UniProt (A8IW03) | Chlamydomonas reinhardtii | |
| 29 | EA (q) | uS17m | polymer | 220 | 22409.3 | 1 | UniProt (A0A2K3DKB4) Pfam (PF00366) | Chlamydomonas reinhardtii | |
| 30 | FA (l) | uS12m | polymer | 128 | 14082.5 | 1 | UniProt (A0A2K3E3V0) Pfam (PF00164) | Chlamydomonas reinhardtii | |
| 31 | GA (h) | uS8m | polymer | 412 | 44616.2 | 1 | UniProt (A0A2K3CNM3) | Chlamydomonas reinhardtii | |
| 32 | HA (k) | uS11m | polymer | 233 | 23121.1 | 1 | UniProt (A0A2K3DQ48) Pfam (PF00411) | Chlamydomonas reinhardtii | |
| 33 | IA (j) | Ribosomal_S10 domain-containing protein | polymer | 612 | 61617.9 | 1 | UniProt (A0A2K3CN25) Pfam (PF00338) | Chlamydomonas reinhardtii | |
| 34 | JA (m) | Mitochondrial ribosomal protein S13 | polymer | 124 | 13758.9 | 1 | UniProt (A8J3J1) Pfam (PF00416) | Chlamydomonas reinhardtii | |
| 35 | KA (n) | Mitochondrial ribosomal protein S14 | polymer | 112 | 13009.2 | 1 | UniProt (A8J6P9) Pfam (PF00253) | Chlamydomonas reinhardtii | |
| 36 | LA (u) | Plastid-specific ribosomal protein 4 | polymer | 136 | 14437.0 | 1 | UniProt (A8J1A6) Pfam (PF17070) | Chlamydomonas reinhardtii | |
| 37 | MA (s) | uS19m | polymer | 116 | 12951.1 | 1 | UniProt (A0A2K3DHN0) Pfam (PF00203) | Chlamydomonas reinhardtii | |
| 38 | NA (g) | uS7m,Ribosomal_S7 domain-containing protein,Ribosomal_S7 domain-containing protein,Ribosomal_S7 domain-containing protein | polymer | 324 | 32755.3 | 1 | UniProt (A0A2K3CXT8) Pfam (PF00177) | Chlamydomonas reinhardtii (Chlamydomonas smithii) | |
| 39 | OA (i) | 30S ribosomal protein S9, chloroplastic | polymer | 446 | 45610.2 | 1 | UniProt (A0A2K3E2Q3) Pfam (PF00380) | Chlamydomonas reinhardtii | |
| 40 | PA (x) | mS29 | polymer | 485 | 49635.8 | 1 | UniProt (A0A2K3DXG4) Pfam (PF10236) | Chlamydomonas reinhardtii | |
| 41 | QA (c) | Ribosomal_S3_C domain-containing protein | polymer | 490 | 50704.2 | 1 | UniProt (A0A2K3D7R0) Pfam (PF00189) | Chlamydomonas reinhardtii | |
| 42 | RA (y) | mS33 | polymer | 209 | 22289.8 | 1 | UniProt (A8JI15) | Chlamydomonas reinhardtii |
Sequence modifications
L, M, N: -17 - 0 (PDB: 7PKQ)
L, M, N: 1 - 253 (UniProt: A0A2K3DAY3)
1: 1 - 99 (GenBank: 12503)
2: 5 - 217 (GenBank: 12503)
3: 1 - 406 (GenBank: 12503)
o: 1 - 215 (UniProt: A0A2K3CQY8)
o: 228 - 246 (PDB: 7PKQ)
o: 246 - 300 (UniProt: A0A2K3CQY8)
j: 1 - 256 (UniProt: A0A2K3CN25)
j: 259 - 290 (PDB: 7PKQ)
j: 291 - 583 (UniProt: A0A2K3CN25)
g: 122 - 164 (PDB: 7PKQ)
g: 164 - 281 (UniProt: A0A2K3CXT8)
L, M, N: 1 - 253 (UniProt: A0A2K3DAY3)
1: 1 - 99 (GenBank: 12503)
| PDB | External Database | Details |
|---|---|---|
| A 52 | - | insertion |
| C 53 | - | insertion |
| PDB | External Database | Details |
|---|---|---|
| U 66 | G 7362 | conflict |
| U 67 | A 7363 | conflict |
| U 68 | C 7364 | conflict |
| U 69 | G 7365 | conflict |
| U 70 | C 7366 | conflict |
| U 71 | C 7367 | conflict |
| U 72 | A 7368 | conflict |
| U 73 | A 7369 | conflict |
| U 75 | A 7371 | conflict |
| PDB | External Database | Details |
|---|---|---|
| - | U 10486 | deletion |
| - | G 10489 | deletion |
| - | U 10582 | deletion |
| - | A 10583 | deletion |
| - | A 10584 | deletion |
| - | U 10585 | deletion |
| - | G 10586 | deletion |
| - | C 10732 | deletion |
| G 251 | A 10733 | conflict |
| - | U 10762 | deletion |
| - | U 10763 | deletion |
| - | U 10764 | deletion |
| - | C 10765 | deletion |
| - | A 10766 | deletion |
o: 228 - 246 (PDB: 7PKQ)
o: 246 - 300 (UniProt: A0A2K3CQY8)
j: 1 - 256 (UniProt: A0A2K3CN25)
j: 259 - 290 (PDB: 7PKQ)
j: 291 - 583 (UniProt: A0A2K3CN25)
g: 122 - 164 (PDB: 7PKQ)
g: 164 - 281 (UniProt: A0A2K3CXT8)
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 44 |
| Total formula weight | 1608538.3 | |
| All* | Total formula weight | 1608538.3 |
