7PJU
Structure of the 70S ribosome with tRNAs in hybrid state 2 (H2)
This is a non-PDB format compatible entry.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | 0 | 50S ribosomal protein L32 | polymer | 57 | 6463.4 | 1 | UniProt (P0A7N4) Pfam (PF01783) In PDB | Escherichia coli (strain K12) | Large ribosomal subunit protein bL32 |
2 | 1 | 50S ribosomal protein L33 | polymer | 55 | 6388.6 | 1 | UniProt (P0A7N9) Pfam (PF00471) In PDB | Escherichia coli (strain K12) | Large ribosomal subunit protein bL33 |
3 | 2 | 50S ribosomal protein L34 | polymer | 46 | 5397.5 | 1 | UniProt (P0A7P5) Pfam (PF00468) In PDB | Escherichia coli (strain K12) | Large ribosomal subunit protein bL34 |
4 | 3 | 50S ribosomal protein L35 | polymer | 65 | 7313.0 | 1 | UniProt (P0A7Q1) Pfam (PF01632) In PDB | Escherichia coli (strain K12) | Large ribosomal subunit protein bL35,Ribosomal protein A |
5 | 4 | 50S ribosomal protein L36 | polymer | 38 | 4377.4 | 1 | UniProt (P0A7Q6) Pfam (PF00444) In PDB | Escherichia coli (strain K12) | Large ribosomal subunit protein bL36-A,Ribosomal protein B |
6 | 5 | 50S ribosomal protein L10 | polymer | 165 | 17736.6 | 1 | UniProt (A0A073UC57) In PDB | Escherichia coli (strain K12) | |
7 | 6 | 50S ribosomal protein L31 | polymer | 70 | 7887.1 | 1 | UniProt (U9XX47) In PDB | Escherichia coli (strain K12) | |
8 | A | 23S ribosomal RNA | polymer | 2903 | 941541.4 | 1 | Escherichia coli (strain K12) | ||
9 | B | 5S ribosomal RNA | polymer | 120 | 38790.1 | 1 | GenBank (1845258627) | Escherichia coli (strain K12) | |
10 | C | 50S ribosomal protein L2 | polymer | 273 | 29923.6 | 1 | UniProt (I2WEU5) In PDB | Escherichia coli (strain K12) | |
11 | D | 50S ribosomal protein L3 | polymer | 209 | 22277.5 | 1 | UniProt (D6I210) In PDB | Escherichia coli (strain K12) | |
12 | E | 50S ribosomal protein L4 | polymer | 201 | 22121.6 | 1 | UniProt (F4T4K4) Pfam (PF00573) In PDB | Escherichia coli (strain K12) | |
13 | F | 50S ribosomal protein L5 | polymer | 179 | 20333.6 | 1 | UniProt (F4VJU9) In PDB | Escherichia coli (strain K12) | |
14 | G | 50S ribosomal protein L6 | polymer | 177 | 18932.8 | 1 | UniProt (I2WZF6) In PDB | Escherichia coli (strain K12) | |
15 | H | 50S ribosomal protein L9 | polymer | 149 | 15789.0 | 1 | UniProt (T6LJC9) In PDB | Escherichia coli (strain K12) | |
16 | I | Ribosomal protein L11 | polymer | 142 | 14894.4 | 1 | UniProt (A0A7U9AQU6) In PDB | Escherichia coli (strain K12) | |
17 | J | 50S ribosomal protein L13 | polymer | 142 | 16050.6 | 1 | UniProt (D8A920) Pfam (PF00572) In PDB | Escherichia coli (strain K12) | |
18 | K | 50S ribosomal protein L14 | polymer | 123 | 13565.1 | 1 | UniProt (I2X0M3) In PDB | Escherichia coli (strain K12) | |
19 | L | 50S ribosomal protein L15 | polymer | 144 | 15008.5 | 1 | UniProt (A0A037Y8L6) Pfam (PF00828) In PDB | Escherichia coli (strain K12) | |
20 | M | 50S ribosomal protein L16 | polymer | 136 | 15312.3 | 1 | UniProt (H4JDM7) In PDB | Escherichia coli (strain K12) | |
21 | N | 50S ribosomal protein L17 | polymer | 127 | 14393.7 | 1 | UniProt (E3PKX8) In PDB | Escherichia coli (strain K12) | |
22 | O | 50S ribosomal protein L18 | polymer | 117 | 12794.7 | 1 | UniProt (T9CL51) In PDB | Escherichia coli (strain K12) | |
23 | P | 50S ribosomal protein L19 | polymer | 115 | 13159.3 | 1 | UniProt (D6HZV3) In PDB | Escherichia coli (strain K12) | |
24 | Q | 50S ribosomal protein L20 | polymer | 118 | 13528.0 | 1 | UniProt (A0A1X3IM74) In PDB | Escherichia coli (strain K12) | |
25 | R | 50S ribosomal protein L21 | polymer | 103 | 11586.4 | 1 | UniProt (D7XN42) In PDB | Escherichia coli (strain K12) | |
26 | S | Ribosomal protein L22 | polymer | 110 | 12253.4 | 1 | UniProt (A0A7U9B009) In PDB | Escherichia coli (strain K12) | |
27 | T | 50S ribosomal protein L23 | polymer | 100 | 11222.2 | 1 | UniProt (F4VJV9) In PDB | Escherichia coli (strain K12) | |
28 | U | Ribosomal protein L24 | polymer | 104 | 11339.3 | 1 | UniProt (A0A7U9B0M1) In PDB | Escherichia coli (strain K12) | |
29 | V | 50S ribosomal protein L25 | polymer | 94 | 10713.5 | 1 | UniProt (A0A7U5LU31) In PDB | Escherichia coli (strain K12) | |
30 | W | 50S ribosomal protein L27 | polymer | 85 | 9146.5 | 1 | UniProt (L4V347) In PDB | Escherichia coli (strain K12) | |
31 | X | 50S ribosomal protein L28 | polymer | 78 | 9027.6 | 1 | UniProt (A0A4P8BWQ5) Pfam (PF00830) In PDB | Escherichia coli (strain K12) | |
32 | Y | 50S ribosomal protein L29 | polymer | 63 | 7286.5 | 1 | UniProt (H4LI22) In PDB | Escherichia coli (strain K12) | |
33 | Z | 50S ribosomal protein L30 | polymer | 59 | 6554.8 | 1 | UniProt (S1ELC8) In PDB | Escherichia coli (strain K12) | |
34 | a | 16S ribosomal RNA | polymer | 1542 | 499873.4 | 1 | Escherichia coli (strain K12) | ||
35 | b | 30S ribosomal protein S2 | polymer | 240 | 26652.6 | 1 | UniProt (A0A6C9U5I4) In PDB | Escherichia coli (strain K12) | |
36 | c | 30S ribosomal protein S3 | polymer | 233 | 26031.3 | 1 | UniProt (A0A0E1M2F3) In PDB | Escherichia coli (strain K12) | |
37 | d | Ribosomal protein S4 | polymer | 206 | 23514.2 | 1 | UniProt (A0A7U9BIE1) In PDB | Escherichia coli (strain K12) | |
38 | e | 30S ribosomal protein S5 | polymer | 167 | 17629.4 | 1 | UniProt (L4IYS1) In PDB | Escherichia coli (strain K12) | |
39 | f | 30S ribosomal protein S6, fully modified isoform | polymer | 135 | 15727.5 | 1 | UniProt (P02358) Pfam (PF01250) In PDB | Escherichia coli (strain K12) | |
40 | g | 30S ribosomal protein S7 | polymer | 179 | 20055.2 | 1 | UniProt (A0A507WWI7) In PDB | Escherichia coli (strain K12) | |
41 | h | 30S ribosomal protein S8 | polymer | 130 | 14146.6 | 1 | UniProt (D8A1L7) Pfam (PF00410) In PDB | Escherichia coli (strain K12) | |
42 | i | 30S ribosomal protein S9 | polymer | 130 | 14886.3 | 1 | UniProt (V6FXA4) In PDB | Escherichia coli (strain K12) | |
43 | j | 30S ribosomal protein S10 | polymer | 103 | 11755.6 | 1 | UniProt (L4V303) In PDB | Escherichia coli (strain K12) | |
44 | k | 30S ribosomal protein S11 | polymer | 129 | 13871.0 | 1 | UniProt (I2WET0) In PDB | Escherichia coli (strain K12) | |
45 | l | 30S ribosomal protein S12 | polymer | 124 | 13768.2 | 1 | UniProt (V0SH91) In PDB | Escherichia coli (strain K12) | |
46 | m | 30S ribosomal protein S13 | polymer | 118 | 13128.5 | 1 | UniProt (B7LHZ5) Pfam (PF00416) In PDB | Escherichia coli (strain K12) | |
47 | n | 30S ribosomal protein S14 | polymer | 102 | 11677.6 | 1 | Escherichia coli (strain K12) | ||
48 | o | 30S ribosomal protein S15 | polymer | 89 | 10290.8 | 1 | UniProt (A0A7U9IWF1) Pfam (PF00312) In PDB | Escherichia coli (strain K12) | |
49 | p | 30S ribosomal protein S16 | polymer | 82 | 9207.6 | 1 | UniProt (A0A4P8C0R3) Pfam (PF00886) In PDB | Escherichia coli (strain K12) | |
50 | q | 30S ribosomal protein S17 | polymer | 84 | 9724.5 | 1 | UniProt (F4VJV2) In PDB | Escherichia coli (strain K12) | |
51 | r | 30S ribosomal protein S18 | polymer | 75 | 9005.5 | 1 | UniProt (A0A6D2XHZ3) In PDB | Escherichia coli (strain K12) | |
52 | s | 30S ribosomal protein S19 | polymer | 92 | 10455.4 | 1 | UniProt (A0A1X3KX01) In PDB | Escherichia coli (strain K12) | |
53 | t | 30S ribosomal protein S20 | polymer | 87 | 9708.5 | 1 | UniProt (A0A557R400) In PDB | Escherichia coli (strain K12) | |
54 | u | 30S ribosomal protein S21 | polymer | 71 | 8524.0 | 1 | UniProt (A0A7U4MMA1) In PDB | Escherichia coli (strain K12) | |
55 | v | P-site tRNA(fMet) | polymer | 77 | 24818.9 | 1 | Escherichia coli (strain K12) | ||
56 | w | P-site fMet-Phe-tRNA(Phe) | polymer | 76 | 24643.9 | 1 | Escherichia coli (strain K12) | ||
57 | y | Dipeptide (FME-PHE) | polymer | 2 | 324.4 | 1 | Escherichia coli (strain K12) | ||
58 | z | mRNA | polymer | 33 | 10480.2 | 1 | Escherichia coli (strain K12) | ||
59 | 4, 6 | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
60 | a | APRAMYCIN | non-polymer | 539.6 | 1 | Chemie (AM2) |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 58 |
Total formula weight | 2233010.5 | |
Non-Polymers* | Number of molecules | 3 |
Total formula weight | 670.4 | |
All* | Total formula weight | 2233680.9 |