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7PD9

Crystal structure of CD73 in complex with riboflavin in the open form

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
5'-nucleotidasepolymer54660464.31UniProt (P21589)
Pfam (PF00149)
Pfam (PF02872)
Homo sapiens (Human)5'-NT,Ecto-5'-nucleotidase
2B, C
(A)
ZINC IONnon-polymer65.42Chemie (ZN)
3D
(A)
CALCIUM IONnon-polymer40.11Chemie (CA)
4E
(A)
DIMETHYL SULFOXIDEnon-polymer78.11Chemie (DMS)
5F
(A)
RIBOFLAVINnon-polymer376.41Chemie (RBF)
6G
(A)
waterwater18.0510Chemie (HOH)
Sequence modifications
A: 27 - 549 (UniProt: P21589)
PDBExternal DatabaseDetails
Met 4-initiating methionine
Ala 5-expression tag
His 6-expression tag
His 7-expression tag
His 8-expression tag
His 9-expression tag
His 10-expression tag
His 11-expression tag
Val 12-expression tag
Gly 13-expression tag
Thr 14-expression tag
Gly 15-expression tag
Ser 16-expression tag
Asn 17-expression tag
Asp 18-expression tag
Asp 19-expression tag
Asp 20-expression tag
Asp 21-expression tag
Lys 22-expression tag
Ser 23-expression tag
Pro 24-expression tag
Asp 25-expression tag
Pro 26-expression tag
Asp 53Asn 53engineered mutation
Ser 145Lys 145engineered mutation
Ser 147Lys 147engineered mutation
Asp 311Asn 311engineered mutation
Asp 333Asn 333engineered mutation
Ala 376Thr 376variant
Asp 403Asn 403engineered mutation
Ser 478Lys 478engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight60464.3
Non-Polymers*Number of molecules5
Total formula weight625.4
All*Total formula weight61089.7
*Water molecules are not included.

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PDB entries from 2024-11-06

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