7OZA
Sulfated host glycan recognition by carbohydrate sulfatases of the human gut microbiota (BT3796_S1_16)
This is a non-PDB format compatible entry.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | AAA, CCC | Putative secreted sulfatase ydeN | polymer | 522 | 58722.2 | 2 | UniProt (Q8A171) Pfam (PF00884) Pfam (PF16347) In PDB | Bacteroides thetaiotaomicron VPI-5482 | |
2 | AAA | HEXAETHYLENE GLYCOL | non-polymer | 282.3 | 1 | Chemie (P6G) | |||
3 | AAA, CCC | 4-O-sulfo-beta-D-galactopyranose | non-polymer | 260.2 | 2 | Chemie (G4S) | |||
4 | AAA, CCC | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
5 | CCC | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID | non-polymer | 195.2 | 2 | Chemie (MES) | |||
6 | CCC | POLYETHYLENE GLYCOL (N=34) | non-polymer | 1529.8 | 1 | Chemie (15P) | |||
7 | CCC | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
8 | water | water | 18.0 | 755 | Chemie (HOH) |
Sequence modifications
AAA, CCC: 20 - 518 (UniProt: Q8A171)
PDB | External Database | Details |
---|---|---|
Met -3 | - | initiating methionine |
Gly -2 | - | expression tag |
Ser -1 | - | expression tag |
Ser 0 | - | expression tag |
His 1 | - | expression tag |
His 2 | - | expression tag |
His 3 | - | expression tag |
His 4 | - | expression tag |
His 5 | - | expression tag |
His 6 | - | expression tag |
Ser 7 | - | expression tag |
Ser 8 | - | expression tag |
Gly 9 | - | expression tag |
Leu 10 | - | expression tag |
Val 11 | - | expression tag |
Pro 12 | - | expression tag |
Arg 13 | - | expression tag |
Gly 14 | - | expression tag |
Ser 15 | - | expression tag |
His 16 | - | expression tag |
Met 17 | - | expression tag |
Ala 18 | - | expression tag |
Ser 19 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 117444.4 | |
Non-Polymers* | Number of molecules | 9 |
Total formula weight | 2838.7 | |
All* | Total formula weight | 120283.1 |