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7OYS

E.coli's putrescine receptor variant PotF/D (4JDF) with mutations E39D Y87S in complex with spermidine

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Putrescine-binding periplasmic proteinpolymer35239454.61UniProt (A0A6S5NLK9)
Pfam (PF13416)
UniProt (by SIFTS) (P31133)
Escherichia coli
2B
(A)
SPERMIDINEnon-polymer145.21Chemie (SPD)
3C, D, E, F, G...
(A)
1,2-ETHANEDIOLnon-polymer62.115Chemie (EDO)
4I
(A)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
5O
(A)
CHLORIDE IONnon-polymer35.51Chemie (CL)
6T, U
(A)
GLYCEROLnon-polymer92.12Chemie (GOL)
7V
(A)
waterwater18.0301Chemie (HOH)
Sequence modifications
A: 27 - 370 (UniProt: A0A6S5NLK9)
PDBExternal DatabaseDetails
Thr 38Ser 21engineered mutation
Asp 182Ala 165engineered mutation
Ser 247Asp 230engineered mutation
Trp 276Phe 259engineered mutation
Gln 348Leu 331engineered mutation
Leu 371-expression tag
Glu 372-expression tag
His 373-expression tag
His 374-expression tag
His 375-expression tag
His 376-expression tag
His 377-expression tag
His 378-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight39454.6
Non-Polymers*Number of molecules20
Total formula weight1402.0
All*Total formula weight40856.6
*Water molecules are not included.

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PDB entries from 2026-01-21

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