7OXY

Crystal structure of depupylase Dop in complex with Pup and AMP-PCP

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A	Depupylase	polymer	508	57288.3	1	UniProt (A0LU48) Pfam (PF03136) In PDB	Acidothermus cellulolyticus
2	B	Prokaryotic ubiquitin-like protein Pup	polymer	28	3198.4	1	UniProt (A0LU49) Pfam (PF05639) In PDB	Acidothermus cellulolyticus (strain ATCC 43068 / 11B)	Bacterial ubiquitin-like modifier
3	A	MAGNESIUM ION	non-polymer		24.3	4	Chemie (MG)
4	A	1,2-ETHANEDIOL	non-polymer		62.1	5	Chemie (EDO)
5	A	PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER	non-polymer		505.2	1	Chemie (ACP)
6	A	ACETATE ION	non-polymer		59.0	4	Chemie (ACT)
7	A	DI(HYDROXYETHYL)ETHER	non-polymer		106.1	3	Chemie (PEG)
8	A	TRIETHYLENE GLYCOL	non-polymer		150.2	2	Chemie (PGE)
9		water	water		18.0	326	Chemie (HOH)

Sequence modifications

A: 1 - 502 (UniProt: A0LU48)

PDB	External Database	Details
Glu 503	-	expression tag
Asn 504	-	expression tag
Leu 505	-	expression tag
Tyr 506	-	expression tag
Phe 507	-	expression tag
Gln 508	-	expression tag

B: 44 - 71 (UniProt: A0LU49)

PDB	External Database	Details
Gln 71	Glu 71	conflict

Contents of the asymmetric unit

Polymers	Number of chains	2
	Total formula weight	60486.7
Non-Polymers*	Number of molecules	19
	Total formula weight	1767.7
All*	Total formula weight	62254.4

*Water molecules are not included.